G35377


Basic Information

Item Value
gene id G35377
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2628787 ~ 2664101 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47306
AAGTACAAGATcacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtacaaccacagtctgatctgaccacattcatacctggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccgccacagtctgatctgaccacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcataccc

Function

GO:

id name namespace
GO:0005198 structural molecule activity molecular_function
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47306 True 689 lncRNA 0.50 3 2628787 2664101

Neighbor

gene id symbol gene type direction distance location
ahcy ahcy coding upstream 662271 1938583 ~ 1966516 (+)
LOC120558247 NA coding upstream 672337 1956316 ~ 1956450 (+)
LOC120558248 NA coding upstream 676303 1952350 ~ 1952484 (+)
LOC120558249 NA coding upstream 681360 1947337 ~ 1947427 (+)
chmp4ba chmp4b,LOC101481733,LOC102786921,LOC102203309,LOC104933698,LOC107093444,LOC108243665 coding upstream 702141 1913110 ~ 1926646 (+)
LOC120558018 NA coding downstream 71758 2735859 ~ 2745280 (+)
LOC120557397 NA coding downstream 146157 2810258 ~ 2818790 (+)
LOC120557395 NA coding downstream 162788 2826889 ~ 2836128 (+)
ccdc51 NA coding downstream 199435 2863536 ~ 2882763 (+)
osgn1 LOC102208111,LOC100711663,LOC103370650,LOC101475239 coding downstream 252695 2916796 ~ 2949567 (+)
G35374 NA non-coding upstream 6047 2621875 ~ 2622740 (+)
G35363 NA non-coding upstream 19271 2577634 ~ 2609516 (+)
G35361 NA non-coding upstream 37439 2481317 ~ 2591348 (+)
G35371 NA non-coding upstream 85580 2522740 ~ 2543207 (+)
G35357 NA non-coding upstream 126339 2460483 ~ 2502448 (+)
G35379 NA non-coding downstream 41499 2705600 ~ 2706455 (+)
G35380 NA non-coding downstream 55973 2720074 ~ 2720701 (+)
G35541 NA non-coding downstream 95103 2759204 ~ 2759496 (+)
G35544 NA non-coding downstream 102706 2766807 ~ 2774590 (+)
G35548 NA non-coding downstream 119851 2783952 ~ 2786339 (+)
G35364 NA other upstream 40625 2583514 ~ 2588162 (+)
G35359 NA other upstream 134196 2487994 ~ 2494591 (+)
LOC120556786 NA other upstream 240813 2385615 ~ 2387974 (+)
asip1 NA other upstream 576644 2024224 ~ 2052143 (+)
G35295 LOC107380983,LOC102290002,LOC108241855,LOC108250349,LOC106456447,LOC101470105,LOC102800009,LOC102214284,LOC101480046,LOC102215411,LOC102307835 other upstream 791132 1811624 ~ 1837655 (+)
G35534 NA other downstream 83119 2747220 ~ 2747772 (+)
G35578 NA other downstream 266823 2930924 ~ 3017125 (+)
G35618 NA other downstream 580130 3244231 ~ 3358820 (+)
epha8 epha8,LOC102791453 other downstream 789499 3453600 ~ 3589612 (+)
G35791 LOC101072424,LOC104921976 other downstream 1284733 3948834 ~ 3950128 (+)

Expression


Co-expression Network