G35548


Basic Information

Item Value
gene id G35548
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2783952 ~ 2786339 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47566
GGACAAAGTAAAtattcaaacaaaaaaatcccaTGAAATAGGAAGTTTCGGAAAACTGGCTGTCATTTACCTGgctctcctttctctccctttgCTCCAGGATATCCATCTCTGCCTggagctcctctctctcccggtCGGCCGTCCAACCCGCTACAGCTCACGTCACATTGGCCGGTCGTCAGAAGCAAGGACACACCCACCAGAACCGCTAGCCCATAATAACCTCCCATGGTCCAAAACACTGGATATAACAATTCATGATGTTTAGTAGAATGGACGAGAAAACACAAGAGATGACGAGAAGAAATTATATCACGTTAaagtcctcagagtcactgcagtggggcctccaaattattgtcaaaaaggtttttttcataaattaaaatgtcttaacataattctgacatattattagcaaataaaaCCACCTATCACCACTGATGCTAGGTtcactggcctataggtaaggtagtcactaagatagccattTACCCATACAGTTAACCCTAAGATTCTTGTGCCacatgtttaatattaaaagatgatttataaaatcatgccaacaattattgttttaatagcttggtattctatgcaaaaataTAAAGGTTTTAGGTCGCCTACacgttattgttattgtttatattatatgCAAcctcattttatacaatatatgaagtagggggtccctgctccgtctcttttttagttaaggggtccttggcttaataaacgttgaagacccctgcgtTAAATTATTGGTTTGTGACACTCTGtatttttgtcaatttcttAGCAACACATCTTGGGTATTTTCACCATTGATTCCAGTATATACTACGTACTCAAtattcatttcccttcagtactccgtctgggtttgcggtatattcatgggttttctccggccaaacatttggcggtccaatcagtgaacagagggagtggctgagaacggtgatgttgaggttgtgcgctagtttgagttgtagttccgtaacggcggcggagaaagacgcgagcgaagccattcggtccgttgtggcaacgctgcagAATATCCAGAAgcccccacggggttcgggaacagtttgattttccagttcGCTCCGTGAGTGGTGAATGGgttggctaaggctaatgctagcgatgctaagccgacgtcatgACCAaatgttagcgattggttatggcagatccagagaggctctgggcagatccaatagttttaaacttcaacagagtacccgccttcaaggaagttaacacttgtcaatggagagtggccagactctctgtacaaatgaaatggaccagagtctggtaggaccaggctagtgtaccagagtctggtaggtccaggctagtgtaccagagtctggtaggaccaggctagtgtaccagagtctggtaggaccaggctaatgtaccggagtctggtaggaccaggctaatggaccagagtctggtaggaccaggctagtgtaccagagtctggtaggaccaggcaaatgtaccagagtctggtaggaccagggtagtgtaccagagtctggtaggaccaggctaatgtaccagagtctggtaggaccaggctaatgtaccagagtctggtaggaccaggctagtgtaccagagtctggtaggaccaggctagtatATACAGACTCAttatttaaatatgaatatttctaGGCCAACAGCATTTCTTCATTACATTTCTGACAGGTTGGAGAAGGCTTTTAAACATCAATAAGACCTTATCTATTAAGAAGCAAAGTTTTCAGAATATAATCAACCAGTTTAATGattgaaaatattttcaaaaataggcaatttaatcattaaattaataaatatttttgcatctcttttcggtgttgtagtttgtagacggtccctaagcactcgtcttgctGTTTCAACACCAGAACTAaccagagctgaattagcacgacttttatgcatttctttctcatctactgcagtcagattcactgtgttcactcagaaGGAATCCATTCACATGGGTAGccacttgtaatgacatctccaacatgttaagaggctaaaagcacgtttaaaacctGCCCTGTtgcagcctcctgggtgctaacgctagcaggaggataacacggtgtaggcagcaccgattatttttggttttctcgctactgacgacactcaaacacattttaaagataAATGTTAACTGAGAAGTTCTTTTTCATAGAAATAGCCAACCTAAATGGCTGTGTGGAATTATTTGGCACGCTGGTTTGCAAAGATAAAGTATGTTAGTGTAAATATTGAACACATGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47566 True 2330 lncRNA 0.42 2 2783952 2786339

Neighbor

gene id symbol gene type direction distance location
LOC120558018 NA coding upstream 38672 2735859 ~ 2745280 (+)
LOC120558182 flnb coding upstream 49418 2640388 ~ 2734534 (+)
LOC120558247 NA coding upstream 827502 1956316 ~ 1956450 (+)
LOC120558248 NA coding upstream 831468 1952350 ~ 1952484 (+)
LOC120558249 NA coding upstream 836525 1947337 ~ 1947427 (+)
LOC120557397 NA coding downstream 23919 2810258 ~ 2818790 (+)
LOC120557395 NA coding downstream 40550 2826889 ~ 2836128 (+)
ccdc51 NA coding downstream 77197 2863536 ~ 2882763 (+)
osgn1 LOC102208111,LOC100711663,LOC103370650,LOC101475239 coding downstream 130457 2916796 ~ 2949567 (+)
mtss1 LOC102789651,LOC101478388 coding downstream 177788 2964127 ~ 3073270 (+)
G35544 NA non-coding upstream 9362 2766807 ~ 2774590 (+)
G35541 NA non-coding upstream 24456 2759204 ~ 2759496 (+)
G35380 NA non-coding upstream 63251 2720074 ~ 2720701 (+)
G35379 NA non-coding upstream 77497 2705600 ~ 2706455 (+)
G35377 NA non-coding upstream 119851 2628787 ~ 2664101 (+)
G35572 NA non-coding downstream 81588 2867927 ~ 2884120 (+)
G35576 NA non-coding downstream 122858 2909197 ~ 2983784 (+)
G35584 NA non-coding downstream 214664 3001003 ~ 3067663 (+)
G35587 NA non-coding downstream 227692 3014031 ~ 3053586 (+)
G35589 NA non-coding downstream 234137 3020476 ~ 3078404 (+)
G35534 NA other upstream 36180 2747220 ~ 2747772 (+)
G35364 NA other upstream 195790 2583514 ~ 2588162 (+)
G35359 NA other upstream 289361 2487994 ~ 2494591 (+)
LOC120556786 NA other upstream 395978 2385615 ~ 2387974 (+)
asip1 NA other upstream 731809 2024224 ~ 2052143 (+)
G35578 NA other downstream 144585 2930924 ~ 3017125 (+)
G35618 NA other downstream 457892 3244231 ~ 3358820 (+)
epha8 epha8,LOC102791453 other downstream 667261 3453600 ~ 3589612 (+)
G35791 LOC101072424,LOC104921976 other downstream 1162495 3948834 ~ 3950128 (+)
G35921 NA other downstream 1701196 4487535 ~ 4585475 (+)

Expression


Co-expression Network