G35618


Basic Information

Item Value
gene id G35618
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 3244231 ~ 3358820 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47669
gagagagagagagagagagagagagagagacagagagagagagagaatgggctTCAGAGGGAACCATCTTCTAGTCTTCCCCAGAGGGCGCCTCCTCTTCTGAgccgtcctcctcctcttcgtcttcctcctcctcgtctcctCCCGCGGCCTCCTTTGTCGTCTTGGGGGCAGGGGAGCTCGCTTTCTTCTcggcctcctcctcttcctcctccagggGACTCTCggggtcctcctcctcctcctcctctttgggTGAGCTCTTCTCCAGGGCCTTGGCGCTGGGGCGCCCCTTCCCCTTTCCTTTCATTGGGCTGGG
>TU47670
acacacacacacacacacacacacacacacacacacacacatacgctggctTGAAATGGGTGAAATTGGCAGTCTGGCGCGTAGCAAACACTCAGCGGTGACCCACCACTCTGCCAGGCAAGGTAACACACCTTTAACAGGGCACCAATAGAGTCTGAAACAAGCAGGGTGAACTTTGAACGGTTTtggaggtttttttttgtaactaaAACTACCAGCTGACTACCAGCTGCCCTGTTAAAAACACACGCTCCCGGTTTAAAAACCACAACGTACCAGATAGAGGGTCAAGGCCTCGGCCCTGCGCGTGTTGACTCGGCGTCGCTTTGTAAATACAGCGCTTTAGGAACTGATACTGAGAGGCTCTGAACGCAACGCTCCCAGTACTCGCAGATATCGGTGAAAGTACAatggtaaaaacaaaaaaaagaagtgtgtgGCCAGTCATGTCAGATCACAGATAAtcccagagagaaagagagagagagaaagaaaaagaaaacaaagaagaggTGAATTTCATTTGTTCACATTTAGGACGGATGCCCACTAGCACGGAGCTCTTGGAAAGGTAGAAATGACTGAGATGGGAGGGTGGGTGGGTAAGGCCGAACGTTGGGACTCCTTACATACACCCTATGATCACATGAGCACAATGTCTTGgttggagagggagggaggggaggaggggaaggGAAAGGGGGAGCAAAACAAGGAAAAGAAAGCACACCAAGTCCAAACCATTGAGCCAGGCCACCAGgagaagagacaaaatactcTAAAACACAGAGCAacgaaagaaaaaactaaatctttgagaagagacacagagagagagagagagagaagagagacagagagagagagagaatgggctTCAGAGGGAACCATCTTCTAGTCTTCCCCAGAGGGCGCCTCCTCTTCTGAgccgtcctcctcctcttcgtcttcctcctcctcgtctcctCCCGCGGCCTCCTTTGTCGTCTTGGGGGCAGGGGAGCTCGCTTTCTTCTcggcctcctcctcttcctcctccagggGACTCTCggggtcctcctcctcctcctcctctttgggTGAGCTCTTCTCCAGGGCCTTGGCGCTGGGGCGCCCCTTCCCCTTTCCTTTCATTGGGCTGGG
>TU47673
ctctccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgctggctTGAAATGGGTGAAATTGGCAGTCTGGCGCGTAGCAAACACTCAGCGGTGACCCACCACTCTGCCAGGCAAGGTAACACACCTTTAACAGGGCACCAATAGAGTCTGAAACAAGCAGGGTGAACTTTGAACGGTTTtggaggtttttttttgtaactaaAACTACCAGCTGACTACCAGCTGCCCTGTTAAAAACACACGCTCCCGGTTTAAAAACCACAACGTACCAGATAGAGGGTCAAGGCCTCGGCCCTGCGCGTGTTGACTCGGCGTCGCTTTGTAAATACAGCGCTTTAGGAACTGATACTGAGAGGCTCTGAACGCAACGCTCCCAGTACTCGCAGATATCGGTGAAAGTACAatggtaaaaacaaaaaaaagaagtgtgtgGCCAGTCATGTCAGATCACAGATAAtcccagagagaaagagagagagagaaagaaaaagaaaacaaagaagaggTGAATTTCATTTGTTCACATTTAGGACGGATGCCCACTAGCACGGAGCTCTTGGAAAGGTAGAAATGACTGAGATGGGAGGGTGGGTGGGTAAGGCCGAACGTTGGGACTCCTTACATACACCCTATGATCACATGAGCACAATGTCTTGgttggagagggagggaggggaggaggggaaggGAAAGGGGGAGCAAAACAAGGAAAAGAAAGCACACCAAGTCCAAACCATTGAGCCAGGCCACCAGgagaagagacaaaatactcTAAAACACAGAGCAacgaaagaaaaaactaaatctttgagaagagacagagagagagagagagagagagagagagggagagggagagaga
>TU47674
ctctccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgctggctTGAAATGGGTGAAATTGGCAGTCTGGCGCGTAGCAAACACTCAGCGGTGACCCACCACTCTGCCAGGCAAGGTAACACACCTTTAACAGGGCACCAATAGAGTCTGAAACAAGCAGGGTGAACTTTGAACGGTTTtggaggtttttttttgtaactaaAACTACCAGCTGACTACCAGCTGCCCTGTTAAAAACACACGCTCCCGGTTTAAAAACCACAACGTACCAGATAGAGGGTCAAGGCCTCGGCCCTGCGCGTGTTGACTCGGCGTCGCTTTGTAAATACAGCGCTTTAGGAACTGATACTGAGAGGCTCTGAACGCAACGCTCCCAGTACTCGCAGATATCGGTGAAAGTACAatggtaaaaacaaaaaaaagaagtgtgtgGCCAGTCATGTCAGATCACAGATAAtcccagagagaaagagagagagagaaagaaaaagaaaacaaagaagaggTGAATTTCATTTGTTCACATTTAGGACGGATGCCCACTAGCACGGAGCTCTTGGAAAGGTAGAAATGACTGAGATGGGAGGGTGGGTGGGTAAGGCCGAACGTTGGGACTCCTTACATACACCCTATGATCACATGAGCACAATGTCTTGgttggagagggagggaggggaggaggggaaggGAAAGGGGGAGCAAAACAAGGAAAAGAAAGCACACCAAGTCCAAACCATTGAGCCAGGCCACCAGgagaagagacaaaatactcTAAAACACAGAGCAacgaaagaaaaaactaaatctttgagaagagacagagagagagagagagagagagagagagggagagggagagaga
>TU47676
ctctccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgctggctTGAAATGGGTGAAATTGGCAGTCTGGCGCGTAGCAAACACTCAGCGGTGACCCACCACTCTGCCAGGCAAGGTAACACACCTTTAACAGGGCACCAATAGAGTCTGAAACAAGCAGGGTGAACTTTGAACGGTTTtggaggtttttttttgtaactaaAACTACCAGCTGACTACCAGCTGCCCTGTTAAAAACACACGCTCCCGGTTTAAAAACCACAACGTACCAGATAGAGGGTCAAGGCCTCGGCCCTGCGCGTGTTGACTCGGCGTCGCTTTGTAAATACAGCGCTTTAGGAACTGATACTGAGAGGCTCTGAACGCAACGCTCCCAGTACTCGCAGATATCGGTGAAAGTACAatggtaaaaacaaaaaaaagaagtgtgtgGCCAGTCATGTCAGATCACAGATAAtcccagagagaaagagagagagagaaagaaaaagaaaacaaagaagaggTGAATTTCATTTGTTCACATTTAGGACGGATGCCCACTAGCACGGAGCTCTTGGAAAGGTAGAAATGACTGAGATGGGAGGGTGGGTGGGTAAGGCCGAACGTTGGGACTCCTTACATACACCCTATGATCACATGAGCACAATGTCTTGgttggagagggagggaggggaggaggggaaggGAAAGGGGGAGCAAAACAAGGAAAAGAAAGCACACCAAGTCCAAACCATTGAGCCAGGCCACCAGgagaagagacaaaatactcTAAAACACAGAGCAacgaaagaaaaaactaaatctttgagaagagacacagagagagagagagagagaagagagacagagagagagagagaatgggctTCAGAGGGAACCATCTTCTAGTCTTCCCCAGAGGGCGCCTCCTCTTCTGAgccgtcctcctcctcttcgtcttcctcctcctcgtctcctCCCGCGGCCTCCTTTGTCGTCTTGGGGGCAGGGGAGCTCGCTTTCTTCTcggcctcctcctcttcctcctccagggGACTCTCggggtcctcctcctcctcctcctctttgggTGAGCTCTTCTCCAGGGCCTTGGCGCTGGGGCGCCCCTTCCCCTTTCCTTTCATTGGGCTGGG
>TU47677
agagagagagagagacagagagagagagacagagagagagagagagacagagagagagagagagagagagagagagaatgggctTCAGAGGGAACCATCTTCTAGTCTTCCCCAGAGGGCGCCTCCTCTTCTGAgccgtcctcctcctcttcgtcttcctcctcctcgtctcctCCCGCGGCCTCCTTTGTCGTCTTGGGGGCAGGGGAGCTCGCTTTCTTCTcggcctcctcctcttcctcctccagggGACTCTCggggtcctcctcctcctcctcctctttgggTGAGCTCTTCTCCAGGGCCTTGGCGCTGGGGCGCCCCTTCCCCTTTCCTTTCATTGGGCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47669 False 319 lncRNA 0.61 2 3285562 3328507
TU47670 False 1143 TUCP 0.51 2 3291804 3328507
TU47673 False 913 TUCP 0.48 3 3281732 3358820
TU47674 False 905 TUCP 0.48 3 3281732 3358820
TU47676 True 1183 TUCP 0.51 2 3281732 3328507
TU47677 False 350 lncRNA 0.60 3 3244231 3328507

Neighbor

gene id symbol gene type direction distance location
mtss1 LOC102789651,LOC101478388 coding upstream 170961 2964127 ~ 3073270 (+)
osgn1 LOC102208111,LOC100711663,LOC103370650,LOC101475239 coding upstream 294664 2916796 ~ 2949567 (+)
ccdc51 NA coding upstream 361468 2863536 ~ 2882763 (+)
LOC120557395 NA coding upstream 408103 2826889 ~ 2836128 (+)
LOC120557397 NA coding upstream 425441 2810258 ~ 2818790 (+)
c4h1orf50 LOC103374819,LOC106909683,LOC106955718 coding downstream 400674 3759494 ~ 3766040 (+)
nuf2 nuf2 coding downstream 448352 3807172 ~ 3830945 (+)
cfap92 NA coding downstream 535485 3894305 ~ 3913220 (+)
hdac11 hdac11 coding downstream 856704 4215524 ~ 4242500 (+)
fbln2 NA coding downstream 914122 4272942 ~ 4361643 (+)
G35585 NA non-coding upstream 20069 3223739 ~ 3224162 (+)
G35589 NA non-coding upstream 165827 3020476 ~ 3078404 (+)
G35584 NA non-coding upstream 176568 3001003 ~ 3067663 (+)
G35587 NA non-coding upstream 190645 3014031 ~ 3053586 (+)
G35576 NA non-coding upstream 260447 2909197 ~ 2983784 (+)
G35704 NA non-coding downstream 282099 3640919 ~ 3641407 (+)
G35718 NA non-coding downstream 311870 3670690 ~ 3677753 (+)
G35736 NA non-coding downstream 408556 3767376 ~ 3767576 (+)
G35737 NA non-coding downstream 409032 3767852 ~ 3768388 (+)
G35739 NA non-coding downstream 413791 3772611 ~ 3829941 (+)
G35578 NA other upstream 227106 2930924 ~ 3017125 (+)
G35534 NA other upstream 496459 2747220 ~ 2747772 (+)
G35364 NA other upstream 656069 2583514 ~ 2588162 (+)
G35359 NA other upstream 749640 2487994 ~ 2494591 (+)
LOC120556786 NA other upstream 856257 2385615 ~ 2387974 (+)
epha8 epha8,LOC102791453 other downstream 94780 3453600 ~ 3589612 (+)
G35791 LOC101072424,LOC104921976 other downstream 590014 3948834 ~ 3950128 (+)
G35921 NA other downstream 1128715 4487535 ~ 4585475 (+)
LOC120557928 NA other downstream 1171013 4529833 ~ 4532862 (+)
cdk5rap1 cdk5rap1 other downstream 1552879 4911699 ~ 4934164 (+)

Expression


Co-expression Network