LOC120557928


Basic Information

Item Value
gene id LOC120557928
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 4529833 ~ 4532862 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48149
gcagcagagagctgaggagagcagATCAGATGATATAAAGAAGATGTGAATTTCACCTCCTTCACTTCTGCTCACAGACTGACTGGTGTGACACTCAAGACTAATCATGAAGAACTTCTTGTCTACAAATGAGCAGCTCTGTAAGAACCAATGTCTGATGTCCCTCAGCGGAAGGTATAAGGCTATCTTTCAGTGTGATGGGAACTTTGTCGTCTATGACTGTACCTGTTGCCCAAACAAGGCTGTGTGGGCCTCAGGCACTAATGGATCAGACGCTGTCCGCGTGATCATGCAGGCTGACGGCAACCTGGTCATTTACAACCAATGTAACCAACCCAAGTGGAGCTCAGGGACGTACATCTCGGGATCGTGCAACGTGTGCCGTCTTGAACTGACGGATTGCGGCAAACTGGTGTTGACCAGAAACTGTCAACAAGTTTGGTGCTCATGCTGAAATTCTGTCTTCACATGACATCCCAAAGCTTTGTTAAATTGAATGCTTTGCAAGTACAAGTCATCTTTGAATGTCAGTGTGAATTACAATAAATCTGCCTGCTGGAATCAAATAAAAGCA
>XM_039798634.1
TCCATCCCCAGATCAGATGATATAAAGAAGATGTGAATTTCACCTCCTTCACTTCTGCTCACAGACTGACTGGTGTGACACTCAAGACTAATCATGAAGAACTTCTTGTCTACAAATGAGCAGCTCTGTAAGAACCAATGTCTGATGTCCCTCAGCGGAAGGTATAAGGCTATCTTTCAGTGTGATGGGAACTTTGTCGTCTATGACTGTACCTGTTGCCCAAACAAGGCTGTGTGGGCCTCAGGCACTAATGGATCAGACGCTGTCCGCGTGATCATGCAGGCTGACGGCAACCTGGTCATTTACAACCAATGTAACCAACCCAAGTGGAGCTCAGGGACGTACATCTCGGGATCGTGCAACGTGTGCCGTCTTGAACTGACGGATTGCGGCAAACTGGTGTTGACCAGAAACTGTCAACAAGTTTGGTGCTCATGCTGAAATTCTGTCTTCACATGACATCCCAAAGCTTTGTTAAATTGAATGCTTTGCAAGTACAAGTCATCTTTGAATGTCAGTGTGAATTACAATAAATCTGCCTGCTGGAATCAAATAAAAGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48149 True 574 TUCP 0.46 4 4529833 4532861
XM_039798634.1 False 562 mRNA 0.45 3 4531936 4532862

Neighbor

gene id symbol gene type direction distance location
LOC120557769 LOC106958509,LOC107723971,LOC107690788,LOC107671222,LOC107579420 coding upstream 4325 4524321 ~ 4525508 (+)
LOC120558177 LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480,LOC104957620 coding upstream 6009 4510543 ~ 4523824 (+)
LOC120556766 LOC104935308,LOC104932967 coding upstream 30739 4498585 ~ 4499094 (+)
LOC120556767 NA coding upstream 31996 4496804 ~ 4497837 (+)
LOC120556803 NA coding upstream 36665 4492593 ~ 4493168 (+)
LOC120558095 NA coding downstream 4609 4537471 ~ 4539747 (+)
LOC120557506 NA coding downstream 23899 4556761 ~ 4557775 (+)
LOC120557505 LOC104935308,LOC104932967 coding downstream 25713 4558575 ~ 4559468 (+)
LOC120557502 LOC105888650,LOC101068541,LOC107388332,LOC103395674,LOC105896821 coding downstream 37048 4569910 ~ 4571535 (+)
LOC120557508 NA coding downstream 51467 4584329 ~ 4585357 (+)
G35834 NA non-coding upstream 159612 4369919 ~ 4370221 (+)
G35833 NA non-coding upstream 160783 4368691 ~ 4369050 (+)
G35739 NA non-coding upstream 699892 3772611 ~ 3829941 (+)
G35741 NA non-coding upstream 737860 3790004 ~ 3791973 (+)
G35737 NA non-coding upstream 761445 3767852 ~ 3768388 (+)
G35925 LOC104957620,LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480 non-coding downstream 72598 4605460 ~ 4610060 (+)
G35941 NA non-coding downstream 77676 4610538 ~ 4613004 (+)
G35942 NA non-coding downstream 83031 4615893 ~ 4617397 (+)
G35958 NA non-coding downstream 158193 4691055 ~ 4694565 (+)
G36022 NA non-coding downstream 267109 4799971 ~ 4800984 (+)
G35791 LOC101072424,LOC104921976 other upstream 579705 3948834 ~ 3950128 (+)
epha8 epha8,LOC102791453 other upstream 940221 3453600 ~ 3589612 (+)
G35618 NA other upstream 1171013 3244231 ~ 3358820 (+)
G35578 NA other upstream 1512708 2930924 ~ 3017125 (+)
G35534 NA other upstream 1782061 2747220 ~ 2747772 (+)
cdk5rap1 cdk5rap1 other downstream 378837 4911699 ~ 4934164 (+)
G36156 LOC103374102 other downstream 1388062 5920924 ~ 5924400 (+)
rybpb rybp other downstream 1502210 6035072 ~ 6055216 (+)
prok2 prok2,LOC103355444 other downstream 1571751 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 1606601 6139463 ~ 6306143 (+)

Expression


Co-expression Network