G35942


Basic Information

Item Value
gene id G35942
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 4615893 ~ 4617397 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48165
CAAAAATCTACATGATGAAACTGAATCGTTTCCTAATAGTTATTGCACTTTTCACTTCCATGACATGAACATACTCATGACTAACACATCCAAACATTTTGGGTGGGTATACAAAATTAGGTTTTATTCTGGGCCACAACACCAATGGGTCATAACTCATTACAACATACAAAAAATACCTCCCAATATGGGAGAGGAATAAGTCAAGTTAAACATCGCAGTTTCATCAAGATTGTCCTGCAGACAGTACAGTTCAACATTCAACAACCAAGGAGAGGAGAAACACGGTGCCATAAATAAAGAGTGGTGTGTAAACCATACGAAGGCAGGCATTTCAAGAAATATCAAACACTGGGATTGCAAACATGAGTTAAAACACACCTTTTAGGAATGAAGAAATACTGTAGCGTTAGTGCCTTTTGTTGGAGGTGCATTCTTTTCCTGTACTGATTTGGGCTGTGAAGTTCTAATCTCGTCCTGGTCAACACATTGAGTATTGATTATTTTCCAACTGACCATTTTCCCACAAAGACGAGCTTCATAAACCTTGCTCTGATTATACAAATGTATGATTTCCAAAACAGCAGTGCATATTTAACTGCATGACAATTGTAGTCTTTCCTGCTTTGGCATTTTAGTGCAGGTCCAGTGATACAGCACCCATAACTGTCCCTTCATAACTGGGTTGCCTGCTTATCATTAGCAAGTTTCCTCTTTTGTTTGGGAATGTGACGATATTTCCAGTTCTTTGGAACAGCTGCAGGGGAGGCTCCTTCTCGGCTCTAAGCTTCAGAGGACGCCTGGGGTTTGAGCTGGGCCTTCTCCATAGTTGTACCGTACGGATCTGACCTTTTGAAGAAGCCCATCTGTATAGTAGATATATGAGCAGGGAGAGTAATAGCAGCCCAGCTAGAATAGCCAGGATGATGATCCACACTGGAACAGGGAACGGATTGTCCGGCTTGTTCCACA

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48165 True 972 lncRNA 0.42 2 4615893 4617397

Neighbor

gene id symbol gene type direction distance location
LOC120557508 NA coding upstream 30536 4584329 ~ 4585357 (+)
LOC120557502 LOC105888650,LOC101068541,LOC107388332,LOC103395674,LOC105896821 coding upstream 44358 4569910 ~ 4571535 (+)
LOC120557505 LOC104935308,LOC104932967 coding upstream 56425 4558575 ~ 4559468 (+)
LOC120557506 NA coding upstream 58118 4556761 ~ 4557775 (+)
LOC120558095 NA coding upstream 76146 4537471 ~ 4539747 (+)
LOC120558218 NA coding downstream 64481 4681878 ~ 4684344 (+)
txnrd3 LOC103366329,LOC102309132,LOC105934676 coding downstream 91284 4708681 ~ 4729627 (+)
LOC120557706 LOC104933218,LOC100705047,LOC101475466 coding downstream 128047 4745444 ~ 4767692 (+)
ppp1r3db LOC104967763 coding downstream 176184 4793581 ~ 4797260 (+)
acot8 acot8,LOC102785802 coding downstream 252317 4869714 ~ 4875274 (+)
G35941 NA non-coding upstream 2889 4610538 ~ 4613004 (+)
G35925 LOC104957620,LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480 non-coding upstream 5833 4605460 ~ 4610060 (+)
G35834 NA non-coding upstream 245672 4369919 ~ 4370221 (+)
G35833 NA non-coding upstream 246843 4368691 ~ 4369050 (+)
G35739 NA non-coding upstream 785952 3772611 ~ 3829941 (+)
G35958 NA non-coding downstream 73658 4691055 ~ 4694565 (+)
G36022 NA non-coding downstream 182574 4799971 ~ 4800984 (+)
G36025 LOC107550338,LOC103365918,LOC104947949,LOC106955159 non-coding downstream 187648 4805045 ~ 4809978 (+)
G36026 NA non-coding downstream 190294 4807691 ~ 4848220 (+)
G36034 NA non-coding downstream 232357 4849754 ~ 4850038 (+)
G35921 NA other upstream 30418 4487535 ~ 4585475 (+)
LOC120557928 NA other upstream 83031 4529833 ~ 4532862 (+)
G35791 LOC101072424,LOC104921976 other upstream 665765 3948834 ~ 3950128 (+)
epha8 epha8,LOC102791453 other upstream 1026281 3453600 ~ 3589612 (+)
G35618 NA other upstream 1257073 3244231 ~ 3358820 (+)
cdk5rap1 cdk5rap1 other downstream 294302 4911699 ~ 4934164 (+)
G36156 LOC103374102 other downstream 1303527 5920924 ~ 5924400 (+)
rybpb rybp other downstream 1417675 6035072 ~ 6055216 (+)
prok2 prok2,LOC103355444 other downstream 1487216 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 1522066 6139463 ~ 6306143 (+)

Expression


Co-expression Network