G36051


Basic Information

Item Value
gene id G36051
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 5017652 ~ 5018636 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48312
GTTTTTTTGtgtgacttgacttgtgactttCTTGACTTACAGTAGGGACTcgacttgacttgcttgattcCCACCACAGTGACTTGAGTCTTGCTTGAAGGTTAACCcctcagtcacattagctacaagagacagcGAAAAAGCGGcaggctgccattcattttcactGGGAGTGGCCGTTTGGTAGCGGAAAGCGGCGAGCTTGCCGCTGCCACGAGCAAGGCggggccaaaatagacaagaagtctaGTTTATCCAAATGCTGAGCGATGCGACGAAGCGACTGCCAATCAGAGTGAAGGCAGCGAGTCGAAGAAAATCATTCAAGATGGCGgaaacgcttcaggacatcgtatttctatatat

Function

GO:

id name namespace
GO:0035235 ionotropic glutamate receptor signaling pathway biological_process
GO:0007215 glutamate receptor signaling pathway biological_process

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU48312 True 366 lncRNA 0.48 2 5017652 5018636

Neighbor

gene id symbol gene type direction distance location
rpn2 rpn2,LOC102784465 coding upstream 113962 4893449 ~ 4903690 (+)
mybl2b mybl2 coding upstream 124873 4881206 ~ 4892779 (+)
ift52 ift52,LOC102785231 coding upstream 138042 4875383 ~ 4879610 (+)
acot8 acot8,LOC102785802 coding upstream 142378 4869714 ~ 4875274 (+)
ppp1r3db LOC104967763 coding upstream 220392 4793581 ~ 4797260 (+)
cntn3b cntn3,LOC100696343,LOC102785363 coding downstream 591374 5610010 ~ 5665053 (+)
pdzrn3b pdzrn3 coding downstream 775096 5793732 ~ 5905163 (+)
shq1 shq1 coding downstream 938635 5957271 ~ 6013954 (+)
LOC120557997 eif4e3,LOC103355441 coding downstream 1099996 6118632 ~ 6132639 (+)
eevs LOC104922196,LOC103355445,LOC104966975,LOC105934428 coding downstream 1396330 6414966 ~ 6426594 (+)
G36044 NA non-coding upstream 77381 4937962 ~ 4940271 (+)
G36035 NA non-coding upstream 137258 4851254 ~ 4880394 (+)
G36034 NA non-coding upstream 167614 4849754 ~ 4850038 (+)
G36026 NA non-coding upstream 169432 4807691 ~ 4848220 (+)
G36025 LOC107550338,LOC103365918,LOC104947949,LOC106955159 non-coding upstream 207674 4805045 ~ 4809978 (+)
G36054 NA non-coding downstream 35795 5054431 ~ 5054972 (+)
G36105 NA non-coding downstream 215747 5234383 ~ 5234591 (+)
G36106 NA non-coding downstream 257817 5276453 ~ 5278682 (+)
G36114 NA non-coding downstream 419521 5438157 ~ 5440609 (+)
G36145 NA non-coding downstream 675757 5694393 ~ 5694946 (+)
cdk5rap1 cdk5rap1 other upstream 83488 4911699 ~ 4934164 (+)
G35921 NA other upstream 432177 4487535 ~ 4585475 (+)
LOC120557928 NA other upstream 484790 4529833 ~ 4532862 (+)
G35791 LOC101072424,LOC104921976 other upstream 1067524 3948834 ~ 3950128 (+)
epha8 epha8,LOC102791453 other upstream 1428040 3453600 ~ 3589612 (+)
G36156 LOC103374102 other downstream 902288 5920924 ~ 5924400 (+)
rybpb rybp other downstream 1016436 6035072 ~ 6055216 (+)
prok2 prok2,LOC103355444 other downstream 1085977 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 1120827 6139463 ~ 6306143 (+)
setmar LOC100698471 other downstream 1616644 6635280 ~ 6638523 (+)

Expression


Co-expression Network