G36106


Basic Information

Item Value
gene id G36106
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 5276453 ~ 5278682 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48385
CtggattattatttaaaaataataggAAAATGTATTGTCCCAAAAAATGTCACGCCGATTTGTTGAAAATGACAAACCCTATGAGTGTATGTTGTACAACATAATAAAAAGGCAATACAAACAAAATCTGTGCAGAGCAAACAAACCTGAAAtctaaaatattacagtagCACATCTTTACATTTCATCACAACAACATTAACAACATATTGTCTCTTATACTTTTAATCCATCAGCGGTGCATCGTATGAAGGTGACAACTAACTCAAAACTTGTCTCCCACAAATTATGTTCATCTACAACTATTTTGAAATACATCTTGATTACGGTCAATGTAATAATGTTGTAATGCAGATTACGGTATGTTCATCATCATAGACAACTGACTGTAAATTATCTACAAATGATTCAGTGTTATTATGTGATATCCTGTCAAGGTATGTTGCAGTAAAATAGCTAAATATGAAGgctgttgttttccaaaaatgtcctGTTTATGTTGGATGGAATATGTTTAATGACAAAAATTGTTTCTTTGATCAAATCATACATGTGCAACTAGGTAAGATGCAGTTTCCCTTTTCAGTATTCTGTATGTATTGACTTTGTTCTGGTGGATGCTAATGTTAACGTTTTGTGAAAAGCGCACTAAATGCACAAGGTTTAGGAACACCTTTATACTGGTGTAACAAATGTATATAGGAGGTGTCCCATCTTATGCCATTTCTCGACACtaaattacataaaatacaattttacaaaGACATTCTGTTTGATAAGCCTGCTTTTGcaaaataattacaatttgtAGAATATAAACTTGATAAGGCATAACAGCTTTGTTAAACACGTCAAGAATTCATCTTATCTGGGTTTGCATCTGTTCCTAATATACAACCTATATAAGCAGCATCTCCAAGTGTTTCTTGAAACACGTCTAAAAGCATCGTTTCCTTgcataaaacaaacataaaaaaacatccaGGGCTGTCCTAACCCTGTGGATGACTGGAGGCTGGAATTAAAGCGTTGATGAAGATTGTCTGTTTTATAATGGGCCTGGTGACACCTGTAGCGACTAGTGGTCACATCAAATTACACATCTAACCTAAATTGTTTTAATGCAAAATGAAACATGGAAAGTCGACTCTGGAGGCAGCAGTCTGACAGATAGTCATCTGAACAATCCGTACAGCTGTAACCCAAATAAACTAGCACAATAAGATTGGATTTATTAACCCAAGAGTAGAAACCTGATGCATGATCGGATGTCTTTTAAGAAACAAATGCCACTAGTTGCCACTGCTTGGGATACATTAGCCATTATGGTGTTCTTTTACATCCTGTACCTGTACAAGCCAGTTAGGTAAATATGCTTTATATGTATTAATTGTTGAGAGTTTGATGAAAACATCAATACCACTCTTGGAAATGAGGGGAAAACGGCTAATAATAAAAATTcctgaaatgtaaaattattccTTTAATTTTTGGGGGTAATTCTGACTCCAACACCAACAgggagtatgtttacatgcacccaatattccactattattcagaatatgacaatattccgaatttgatacaggtcatgtaaacagcatattccggttggatattccgaataaggcctttttccgaatataatattttccgattaagacatgggggatattccggtattatttgggttttagaagcattctttggacatgtatttagcgcattcggaatatgatctcaatcagggtttttaccgcaatttacggcctcttgcctgtttaggGATTATGGTcggctctgtgcgttgctatggttgctgtacacaaaccaaccagccaacagtttgcaaggctgcagacccaaTAAGAAGGAGGAACGCAGCTACTtgtaaacattatcaaagacttggatatcaacaggtttttggatatgtgcacacatcgctacgacgaccttttcaagaagctggttgaaggaatgaaagagggacgctgtgttcgaaGGATACAGCAAGAAAACTTCATTTTTCTTCGGAAAAATcgtattttgcacggctacatgtaaacgggaatattagttaaatattcactttcattaaccatgtaaacagcttagttggAATATCGTCTTTATCGGAATAAGGgctaaaaaccggaatattatgtgcatgtaaacgtagtcagtgaaaaatcacaaagtgctacAATTGAATTAGATTTTAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48385 True 2230 lncRNA 0.36 1 5276453 5278682

Neighbor

gene id symbol gene type direction distance location
LOC120556975 LOC103365933,LOC100695288,LOC105934533 coding upstream 232976 4956351 ~ 5043477 (+)
rpn2 rpn2,LOC102784465 coding upstream 372763 4893449 ~ 4903690 (+)
mybl2b mybl2 coding upstream 383674 4881206 ~ 4892779 (+)
ift52 ift52,LOC102785231 coding upstream 396843 4875383 ~ 4879610 (+)
acot8 acot8,LOC102785802 coding upstream 401179 4869714 ~ 4875274 (+)
cntn3b cntn3,LOC100696343,LOC102785363 coding downstream 331328 5610010 ~ 5665053 (+)
pdzrn3b pdzrn3 coding downstream 515050 5793732 ~ 5905163 (+)
shq1 shq1 coding downstream 678589 5957271 ~ 6013954 (+)
LOC120557997 eif4e3,LOC103355441 coding downstream 839950 6118632 ~ 6132639 (+)
eevs LOC104922196,LOC103355445,LOC104966975,LOC105934428 coding downstream 1136284 6414966 ~ 6426594 (+)
G36105 NA non-coding upstream 41862 5234383 ~ 5234591 (+)
G36054 NA non-coding upstream 221481 5054431 ~ 5054972 (+)
G36051 NA non-coding upstream 257817 5017652 ~ 5018636 (+)
G36044 NA non-coding upstream 336182 4937962 ~ 4940271 (+)
G36035 NA non-coding upstream 396059 4851254 ~ 4880394 (+)
G36114 NA non-coding downstream 159475 5438157 ~ 5440609 (+)
G36145 NA non-coding downstream 415711 5694393 ~ 5694946 (+)
G36170 NA non-coding downstream 742171 6020853 ~ 6021123 (+)
G36175 NA non-coding downstream 776562 6055244 ~ 6056226 (+)
G36201 gpr27,LOC103355443,LOC102784210 non-coding downstream 832995 6111677 ~ 6114313 (+)
cdk5rap1 cdk5rap1 other upstream 342289 4911699 ~ 4934164 (+)
G35921 NA other upstream 690978 4487535 ~ 4585475 (+)
LOC120557928 NA other upstream 743591 4529833 ~ 4532862 (+)
G35791 LOC101072424,LOC104921976 other upstream 1326325 3948834 ~ 3950128 (+)
epha8 epha8,LOC102791453 other upstream 1686841 3453600 ~ 3589612 (+)
G36156 LOC103374102 other downstream 642242 5920924 ~ 5924400 (+)
rybpb rybp other downstream 756390 6035072 ~ 6055216 (+)
prok2 prok2,LOC103355444 other downstream 825931 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 860781 6139463 ~ 6306143 (+)
setmar LOC100698471 other downstream 1356598 6635280 ~ 6638523 (+)

Expression


Co-expression Network