G36114


Basic Information

Item Value
gene id G36114
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 5438157 ~ 5440609 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48400
TATCAAGAACATTAATCATCTTTCATTAGTGATGGCTGTGACCAAACAGGCAGTCAGACCATTACCAGGATTTAAGAAAGTAAAGCAATTTAATGACATCAAAAAACACCAATTAACATTCTTAACATGCAATGGCAGAATTTTTACAAAACATTGCAATTTTTCTGATCGTGGTGCTAATGTTAATTCTGACCAACATAATGATTTTGAACGGCAGTATATTGAAAGTAACAGAGTAAGACTTGTTAAGACTGATGTAGCAGTGACTACCGTCTATTGTATCTTAGCAGGGTAGGAAGATGTCAAAAATCATGCAACCAGATTACAGTATTCTGATTACAAACAACGTCTATAATCCATTACAGGTACTGTGCACTTGCTTCTTTAAAGGGGCAGTCCACCAGTTCATACATGAAAATCGGTTTACGGATTATTGAGAGCACTACTCAATCTACAAACACAGTTGTATAATGTTCAGTGGCTCTGGAGATGCTCTGTGAAGCAAAAAAGAACTGATGATGTCATAATGAAGTCACTGGGGTTATCTAATCTTGGACTTTGAGACTGCCAATTATCGATTACGActcatatttacgtttatagtTGAGGTGCCCTAAagtggccgtagtaattatgacaggaagtaaggtgatgaAGTATAAGAAATTCCACATAGAGGAAGCTGTGAGTTGTGTTCTGCGTCACATGCGTAAGTGAAGTAACGTAacatgattttaacccaaaccgcaatctttttctaaacataactaagCAGTTTTTGTGCGTAAACCTCGCCATACTGCGTCCGTTTCACAACATTAATGGCGCGTGTCGgtaacgttctctggtttagatcttagactgtatattaaagtctccacttcctcccactgtacaaaagtgaagccaaaatatcccggaTACGGAACGCTGCCATTTTGTAAGACTCTGCGCAGTAGTGATCAGGCGGTGGAGCCGCGGTACCGAAGTCCTGCCCTTACACCCGCCCGACCAATCACGAATAAATCACAATCATGACGTTTCACCCCGTTTGCAAAGCAACAAATgactaataaaaaccaaactgatCAGAAAGAGGAccacttgaacaaacatcagcgcgataagaactacctaaaatgacagaacCCATCTTTGGGAGAAATGTATTTGACGTTTGACGTGTACTTTCCTTGGCCCATATCCCATCCGCTAACATGGAGTGGGCGGGATTTATGACCTttatggggtggggggggggaatcaagatgttttggcttcacttacaCAGACTATGCATCAACCCCTTGTTTAGATATAAAGATGGAAAATGCTCCCGTGTGTGGGTTTTCCTGCTACCTCTCGGTTTAttaaaacgctcctgtgggtcgtatcaGACGGTAGAAATAAACAACCTGTATTGTTGTTTGGTTTGGAGGACCGGTTTGcatttttggagcttgacctAGGGACTGCTTCCATATTTTCCATTCCATTATTAGCACGGGGCTGTAACAGCACAGACCGAGGTCTGTAACTTCTCCTGTCCAACGCATCTGAATGCAACAAAAAAGACATAAGAGCTacgttttcttttcttctaacATCACAGGGAGATTCATTACTCTTTTATACTCACATTTAATGAATCAATTTCAAATATAACAGGTCAGTAATATTTgctccaattaaaaaaaaaacaatatcaacTTGATTTTCCCACTTATCTGTGGTCTGCTACAAGATGATATCACAGGCAAAGCTGCATATAATGATGTATAATGGAGAGTGGCATTTTCCTGACATTTGTACAAACAGTACTGCAGTTGAAgtactggagataaaaaaaaagaaaattcaagCCCTCTAAATTGTTTGtgtaataattatttaaaaaaaaaagacactccgcacatacaatatacactatatatacacagtatttaGTAATGGTCATTCTGTTGCAACCCGACAAAACAGAGCTTTATAATATGAGGGTGGCAGTGTGCAGTTGGAAATGACGCATTACATTTGACACAAAACTTGTGCTCGGTATGGATAATGTCTGTTTCCTCTTTCATTTGTTCCTCCCAGCAGGTTTTAATGAAAACGTTGTCTAGGCGAAGATGGATGGCGGTTTCGGCTCCTCACGCCGGGGTCTGAATAGTGGCTTTGATCTCAGCGGACACCCTCTTCTCCTTTCGCCCGGCGTACTCGCCGATAAAGGAGCCGTCCTCGTTGAACTGAACGTCCTCGTCCCCGTAGTCCACCAGGCTGTCCCCGCTGTCCCCGGCTTTGATCTCTCTGCTCAGCGAGTGTTGGCTGCCCTTCAGTGGCTTCTCGTCGTTGTCACTGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48400 True 2359 lncRNA 0.41 2 5438157 5440609

Neighbor

gene id symbol gene type direction distance location
LOC120556975 LOC103365933,LOC100695288,LOC105934533 coding upstream 394680 4956351 ~ 5043477 (+)
rpn2 rpn2,LOC102784465 coding upstream 534467 4893449 ~ 4903690 (+)
mybl2b mybl2 coding upstream 545378 4881206 ~ 4892779 (+)
ift52 ift52,LOC102785231 coding upstream 558547 4875383 ~ 4879610 (+)
acot8 acot8,LOC102785802 coding upstream 562883 4869714 ~ 4875274 (+)
cntn3b cntn3,LOC100696343,LOC102785363 coding downstream 169401 5610010 ~ 5665053 (+)
pdzrn3b pdzrn3 coding downstream 353123 5793732 ~ 5905163 (+)
shq1 shq1 coding downstream 516662 5957271 ~ 6013954 (+)
LOC120557997 eif4e3,LOC103355441 coding downstream 678023 6118632 ~ 6132639 (+)
eevs LOC104922196,LOC103355445,LOC104966975,LOC105934428 coding downstream 974357 6414966 ~ 6426594 (+)
G36106 NA non-coding upstream 159475 5276453 ~ 5278682 (+)
G36105 NA non-coding upstream 203566 5234383 ~ 5234591 (+)
G36054 NA non-coding upstream 383185 5054431 ~ 5054972 (+)
G36051 NA non-coding upstream 419521 5017652 ~ 5018636 (+)
G36044 NA non-coding upstream 497886 4937962 ~ 4940271 (+)
G36145 NA non-coding downstream 253784 5694393 ~ 5694946 (+)
G36170 NA non-coding downstream 580244 6020853 ~ 6021123 (+)
G36175 NA non-coding downstream 614635 6055244 ~ 6056226 (+)
G36201 gpr27,LOC103355443,LOC102784210 non-coding downstream 671068 6111677 ~ 6114313 (+)
G36231 mitfa,mitf-a,LOC100534525 non-coding downstream 988898 6429507 ~ 6433109 (+)
cdk5rap1 cdk5rap1 other upstream 503993 4911699 ~ 4934164 (+)
G35921 NA other upstream 852682 4487535 ~ 4585475 (+)
LOC120557928 NA other upstream 905295 4529833 ~ 4532862 (+)
G35791 LOC101072424,LOC104921976 other upstream 1488029 3948834 ~ 3950128 (+)
epha8 epha8,LOC102791453 other upstream 1848545 3453600 ~ 3589612 (+)
G36156 LOC103374102 other downstream 480315 5920924 ~ 5924400 (+)
rybpb rybp other downstream 594463 6035072 ~ 6055216 (+)
prok2 prok2,LOC103355444 other downstream 664004 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 698854 6139463 ~ 6306143 (+)
setmar LOC100698471 other downstream 1194671 6635280 ~ 6638523 (+)

Expression


Co-expression Network