G36485


Basic Information

Item Value
gene id G36485
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 7357751 ~ 7359732 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48909
AAAGACAAAAGTCAAGAAGCACTCATCTAGCAAAAATCTAGCTTTGTTTATTAGCAAAGCACAGTGAGAGCCAGCTGCTCTCTGGAATGTTGTTCTAATGCAGTTACAGCAGCCAAATGTGTTTAAATAACCAAAACGGCACTTGCACAATGCATTTTCACTCATACTACAGCAGATATTATCCAGTTTTAACCACCTCGgcaaattattttcattaaacTGGCATGGTCAAAAGAATATTGCACCATGTCTTTGGTTAAAAATAGAATTTCTGTCAATTACAATTCTGTTAACATACACGAAAAAGAGCTTTGACATGGACGGGACACTGAATGAAAGGGACACAAGTGGGCACTGCAGACAAGACAAATAGAAGAAAGCTAGAATTCTACTGCATGAGCCAAAACCATTTATTTGAAACAGAGGATCCTCAAGAAACCTTCCAATAGCTCTTCCCCGCTCCATCCCCTGAAATCCCTGGAGACAAACTAGTGTACACATCTGGCTCTTGGCCATGTGCCCATGCCCGCACTTTCAACAAGCAGTCTGGGGTTTGGTTCTTGCTTACAGTCTTTGTGTACCCTCTGCGTGCTGTGAGCGCCAGACCCCTGAGTCATGTTGGTGACGTCCGCTAGCTCTCGCCTCTGGGACAAGGTGGTCACCATCCGCTCCAGCTTGGAGCGGATGGTGGAGTAGTGGTGCTGGCGCTCTTTGGTCAGCTTGTGTAAGGAGTCCTTTAAGGTGCCGTGTGGAGCTGCCTGGGTGGGCGAGCTCTGCCCGGGAGACGGAAAGGAGGGAGAGGTGGCCTGGTTTGGCCCTGTGCTCGTTGGTGTGATAAGGTTGGGGTCTGGTGTGAGCTGGAGGTCAGTCTGGGTGTCACTGTCCATAAATGACTGGCTGGTCTGAGTGGAGGCGTGGCATGAGACGGGGCTGGGGGTCGCTGGCTCTTTCTCCGCTATCTGATTTGCAGGGAAGCACTGAGTGGTGCTACCGGCCAGGATCTCCTCCTGCATGTGCTGCTGCTCGGTCCACTCCTCACCTACGGTGGAGGAGTCGGACACCGTGTTGGTTTTACGACCATCTGGAGTCGATGGTTCACGCGACGGCTGGACAGCTGAGTTTAAGGGGTTGCGGCTGGGCGTGCTGGTCAGACACACTGGCCTCTCTCTGGCCAGTTGAGGGGAGGAGGTGAAGGAGTGTTTGATGAGGAGATGCTCGTAGATGCTGCTGTTTCGGACACTTGGAGGTCCTCGAACGTTTATAGGTAGAGACTGGGCGTAGAGGATGCGGAACTCCTCGTCAAATCTCTCCGTTATCTGACCAGAAAGCTCGATTAGGTTGCTGCTGTTTAGTTTGCCATCAGTCCAGTTGTACCTGCACAGAAATGGGATTTAACAACATGCGTGAATGAAAAGCCACGCCCAGCTTTACAGGCCCACCACATACCCGAAGGTCATCCAGGCAAACACCGACATTTCTGCACATCTTGAGGAAAGCAGGAGCACATGATTGGTCCAGCAGGATGTAGACAGGGACTTTGCGGTGGGAGCATGCCTCCTGAAGATCCTTAAAGATATCCAGGTCGGTCAGGGAGTCTGTAACTATGGCAATCACCTGCAGTGGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48909 True 1627 lncRNA 0.51 2 7357751 7359732

Neighbor

gene id symbol gene type direction distance location
mafbb mafb,LOC104945735 coding upstream 20439 7335466 ~ 7337312 (+)
gata1a LOC100696076,LOC102798593,LOC101485806,LOC102310803 coding upstream 40669 7312734 ~ 7317082 (+)
LOC120557474 traip coding upstream 266999 7082265 ~ 7090752 (+)
sema3fb LOC103371090,LOC104933620 coding upstream 416139 6882145 ~ 6941612 (+)
arl8bb arl8b,arl8a,LOC107095653,LOC105934196,LOC106565753,LOC103355426 coding upstream 571484 6775726 ~ 6786267 (+)
si:ch211-232b12.5 LOC104939380,LOC103365892,LOC100697406,LOC102796719 coding downstream 2208 7361940 ~ 7377650 (+)
snai1a LOC104939346,LOC103358824,LOC108244374,LOC107385873 coding downstream 53057 7412789 ~ 7416280 (+)
myh7ba LOC103358826,LOC104966023,LOC101480568,LOC102289245 coding downstream 74478 7434210 ~ 7449018 (+)
zmynd8 LOC103358838 coding downstream 350234 7709966 ~ 7727318 (+)
LOC120557338 NA coding downstream 368417 7728149 ~ 7751120 (+)
LOC120557355 NA non-coding upstream 27123 7329295 ~ 7330628 (+)
G36470 NA non-coding upstream 83872 7273081 ~ 7273879 (+)
G36469 NA non-coding upstream 84951 7272454 ~ 7272800 (+)
LOC120557300 NA non-coding upstream 99674 7242362 ~ 7258077 (+)
LOC120557301 NA non-coding upstream 125281 7225630 ~ 7232470 (+)
G36529 NA non-coding downstream 18963 7378695 ~ 7454262 (+)
G36563 ndrg3 non-coding downstream 116402 7476134 ~ 7479379 (+)
G36568 ndrg3,LOC105922538 non-coding downstream 128164 7487896 ~ 7518266 (+)
G36604 NA non-coding downstream 161448 7521180 ~ 7525963 (+)
G36609 NA non-coding downstream 171985 7531717 ~ 7532203 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 51408 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 85383 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 170537 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 719228 6635280 ~ 6638523 (+)
foxp1b foxp1 other upstream 1051608 6139463 ~ 6306143 (+)
G36744 NA other downstream 868030 8227762 ~ 8228720 (+)
prickle2b prickle2 other downstream 2400501 9760233 ~ 9856656 (+)
G37197 NA other downstream 2945455 10305187 ~ 10309996 (+)
glrx glrx other downstream 3028176 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 3637498 10997230 ~ 11012909 (+)

Expression


Co-expression Network