prickle2b (prickle2)


Basic Information

Item Value
gene id prickle2b
gene name prickle2
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 9760233 ~ 9856656 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU49739
GCTGAACCCTGCAGATGAGCCGCAGAGAGGACAGCCCTGCATCAGCTGTGGAGAACAGTGTCCTGGCTTTGCCCTGCACAAGTGGAGTTAGAAGACCAGCCAGGCCAGTGCAGCAAGGTTTAAG
>XM_039797359.1
TAGGACTGCAGCCTGGGCTCGGTGCGTTTTGAGAAAGTCGTGAGGGCATTTTATCATTTGCGCACTGATCTCCAGTTTCGTCTGTGTGCTATTTGTTCCCGTTAGTAGCCGACTGTGCCTTACCTCTCCTGTCATCAGCCTGTCATGTTCAGTCGCAGCTATAAGAGAAGAGATTCCAGCAAATCGCTGAACCCTGCAGATGAGCCGCAGAGAGGACAGCCCTGCATCAGCTGTGGAGAACAGTGTCCTGGCTTTGCCCTGCACAAGTGGAGGAAGATCTGTGTGCACTGTAAGTGTCGCCGTGAGGAGCATGCTGTAACAGCCATGCCTGTAGAGATGGAGAAGACGGTCACCAAGCTGATGTACGACTTCCAGAGGAACTCCACCTCTGACGACGACTCGGGCTGTGCCCTGGAGGAGTACGCCTGGGTCCCACCAGGACTCAAACCTGAGCAGGTTCACCAGTACTACAGCTCACTGCCCGAGGACAAGGTGCCTTATGTGAACAGCCCAGGAGAGAAATACCGAATCAAACAGCTGCTCCAGCAGCTCCCGCCCCACGACAATGAGGTACGCTACTGTAACGGTTTGGACGACGAGGAGAAGCGAGAACTAAAGCTCTTCAGTAACCAACGAAAACGGGAGAACCTGGGCCGCGGCAACGTCCGGCCGTTCCCCGTGACGATGACGGGGGCAATCTGCGAACAGTGCGGAGGCCAGATAAATGGCGGAGACATTGCCGTATTTGCATCACGGGCAGGTCACAGCGTGTGTTGGCATCCAGCCTGCTTCGTGTGCAGCATGTGCAACGAGCTTCTGGTGGACCTCATCTACTTCTACCAGGACGGGAAGATCTACTGCGGCCGGCACCACGCCGAGAGGCTGAAGCCTCGCTGCACCGCCTGCGATGAGATCATCCTTGCGGATGAGTGCACTGAGGCAGAGGGGCGTCACTGGCACATGAAGCACTTCTGCTGTTTCGAGTGCGATACTGTGCTGGGGGGCCAGCGCTACATCATGAAGGAGGGTCGGCCCTACTGCTGTTCCTGCTTCGAGTCCCTCTACGCAGAGTACTGCGACTCCTGCGGGGAACATATTGGCATAGACCAAGGCCAGATGACGTATGATGGGCAGCACTGGCACGCCACAGAGGGCTGCTTTTGCTGTGCCCGCTGTAAACGCTCTCTGCTGGGTCGGCCTTTCCTGCCCAAGCAGGGCCAAATCTTCTGCTCACGCTCCTGCAGCCTGGGGGAGGAGCCCAATGGCTCTGACTCCTCTGATTCGGCCTTCCAAAGCGCTCGCTCCACCAGAGAGTCCAGACGCAGCTCCAAGGCAGGGAAGAGTGGAGGAGGGGGTGGAGTTCAGACTGAAAGATTTTCAGGGGAGGTGGACCCACTTTCTTTACAAATGGATCTTCTGAGTCTATCCAGCCAAACACCCAGTTTGACACGCGAGCCACCTGCCTGGCAGAGCCAAGAGCAAGCAGGTGATGTCTATAATTATGAATCCCAATCAGATCCAACTACCAACCCCACCCCTCTCCAGCTTCTTAGCCAGTGCAATGTCAGGACGGCCTATAACCCCACCTGCTCTGGACAGAATAATCAACAGCAAGATCACAGGATCAAGGAGAACGGAGGTTTAAAGAGACCACCCATCTCAGCCATGAAGGGCCACTCTCTGAATGACATGTGGTTCCAACAGCCAGCTCCAGAGGAGTACTATCCACCCAAACTGCGGACCCAAAAGAGCTTCACAGAGGTGTCCCATTGTTCTCAGCACCACAATGGCTTCTCCTCTGACAAGCGCTCCATCAGTTTGCACGGCTTTCAGAGGGACAGGGACAGAGAGGCGGGGCCTCCAGCAGCAACCCAGGTGGCAAGAAGCAGGAACCCCATCAATGCACTTAACTTCACAGAGCAACTGACTCCTCTGGAGCAGACCCCAAGAGGATCCATGGAGTCCCTGGCCCTGTCCAATGCAACAGGCAACTCAGCAGATGGAGGAAAGCGTCAGGAGCACCTTTCTCGTTTCTCGATGCCGGACCTGAGCAAAGACTCTGGAATGAACGTGTCAGAGAAAAGTAACATGGGCACCCTCAACTCCTCAGTGCAGTTTCGTAGCTCTGAGTCTATTCACAGCCTCACCGCCAGTCAGCCCTACATGGAAATGGATCCTCACAGGTCCTCCCAGTACCAGGTGCAGTACTGCGACCCCCCTGGCATGGGTATGGGTATGACTCATTTACCGCCTGGCTTCACATTCCAAGAAGAGGATAGGGTAAGTTTGGTGAGCAGCGCCAACGCTGCCCGCCTGCCACCCATTAGTGAGCGCAGGGTGGGTGGAGgcggaggtggaaggggagccAGTATCCGGTTAGATGCTCCGGAGGAGACTCCTCAGAGGCGCCGgcaccaccaccaccgctccCGTAGATCCCGCCGGTCTCGTTCAGAAAATGCTCTCAACTTGGTAACAGAGCGAAGAGTCAGACCTCAAGAAAGATCCCAGCTGCGTGTCTGTGAGGATTACGATCGTTTCCCGCCGCCAAGGAGCGCCAGGGACCAGTTCGGagtaggaggaggaagagggggaaGATACCAGCCCCAACCCTTCAGGCCATGTCCCAGAACCACTTCAGACCTGACTCTTCAGAACCCTGGGGCCAGCCGGCGCACTGGCTTGAACCAATACTCTTGGGATGATTACGATGACGATGGCTGGTGCTCCACCTGCTCTTCATCCTCCGAATCAGAGGATGAAGGTTACTTCTTGGGTGAGCCAATCCCCAGACCCATCCAGCTGCGCTACCTCAGCAACCAGGAGCTCGTCCATAAGTACAACACAGGTATCGGCGGACCCAACCGCAGTGGGCAGTTACACACCCGCAAACGCAGAAAAAGCAAGAACTGCATTATCTCCTAACATCCTGTCATCTGGTAAAGgaaatgactttttattttttatttttttttccagcttgtGTACACTAACATCTTCCATCTGGaacgtaaaaataaataaaacgcaGTCCATTTATTCAGTGTTGTTGAGTGTTGAATATCATGTAATTGAACGTCAGTGATGAATTACAGTCGGTAAACAGTGAAAAGCAGCagtgtttgcatgtttgttcatgttaaTGTTTCGGAATATCTCCTGAGTATTAAAGCTAACAGTTATGTGTGCAGTTTTATCAAGtcacaacatattttttttaaagctgatgTGCAATTTAGTTTCTTTTTATCATAACTTAATTTCCATGCAGCAAACAAGTGTGCGACGTAGTCAGTTTGGTACAGTTTAGCTTTTTCATGCAATGTGATTTAgatatacaatatactgtactatTGTATTTTAGTTCATAGTATGTACATAGATAAATGAATTAATAATTTCACTTAAATTAAGGAAGTCCATGTAAATATGGTTGTAAATGAGGCCtcacatatttttatattttgtatggATAGAATCATTTATGTATTAAATATCTATAATGTAGagatagaaaatgaaaaacacaacTTATGCATGTTTTATGTGGCTGACCTGGTCCTGCATTTGGAATAAAGGAGAACTTCACTGAG
>XM_039797360.1
GTGGGTCTGTCAGCAGCGAGCGGAGCAGCTCCACACGTATGCTCAGTGCTTTTAACGAAACTCCGCACGGATCTCCATTTAGAGCCGTCAGCAGTAACCTAACCCTGCTTCCAAGAGAGATTTCTGTCTTATTCATttggattttcaaatattttgtcGGAATCTGCGCTCTCGTTTGGATCTGTAAACGGGGATCTGATTTTACGCACTTTAAGTTGGCTCTCTATCTGCGCTTTTCTCCTCATTTGCTCAACTCCTGAATGTGTTTGCGGAGAGCAGGGGGTTGACAAAAGGCGTTTAAACGGAGGGGGTACATGTAGCAGAGGGGTGCAGACACCGCACAGCGGGTAAGAGTGGGGTGTTTGCGTGGCAAAGCCGTGGCGTTGGAGTTGTATGACAAATTCTGCAATGAGAAAGACGCATTTTAAAACCCGCACCACCACAACCAGCACCGACGTCAGGACTATGGCTGACATCCGTCGCAGTTTGTAAGAAGGAAGATCTGTGTGCACTGTAAGTGTCGCCGTGAGGAGCATGCTGTAACAGCCATGCCTGTAGAGATGGAGAAGACGGTCACCAAGCTGATGTACGACTTCCAGAGGAACTCCACCTCTGACGACGACTCGGGCTGTGCCCTGGAGGAGTACGCCTGGGTCCCACCAGGACTCAAACCTGAGCAGGTTCACCAGTACTACAGCTCACTGCCCGAGGACAAGGTGCCTTATGTGAACAGCCCAGGAGAGAAATACCGAATCAAACAGCTGCTCCAGCAGCTCCCGCCCCACGACAATGAGGTACGCTACTGTAACGGTTTGGACGACGAGGAGAAGCGAGAACTAAAGCTCTTCAGTAACCAACGAAAACGGGAGAACCTGGGCCGCGGCAACGTCCGGCCGTTCCCCGTGACGATGACGGGGGCAATCTGCGAACAGTGCGGAGGCCAGATAAATGGCGGAGACATTGCCGTATTTGCATCACGGGCAGGTCACAGCGTGTGTTGGCATCCAGCCTGCTTCGTGTGCAGCATGTGCAACGAGCTTCTGGTGGACCTCATCTACTTCTACCAGGACGGGAAGATCTACTGCGGCCGGCACCACGCCGAGAGGCTGAAGCCTCGCTGCACCGCCTGCGATGAGATCATCCTTGCGGATGAGTGCACTGAGGCAGAGGGGCGTCACTGGCACATGAAGCACTTCTGCTGTTTCGAGTGCGATACTGTGCTGGGGGGCCAGCGCTACATCATGAAGGAGGGTCGGCCCTACTGCTGTTCCTGCTTCGAGTCCCTCTACGCAGAGTACTGCGACTCCTGCGGGGAACATATTGGCATAGACCAAGGCCAGATGACGTATGATGGGCAGCACTGGCACGCCACAGAGGGCTGCTTTTGCTGTGCCCGCTGTAAACGCTCTCTGCTGGGTCGGCCTTTCCTGCCCAAGCAGGGCCAAATCTTCTGCTCACGCTCCTGCAGCCTGGGGGAGGAGCCCAATGGCTCTGACTCCTCTGATTCGGCCTTCCAAAGCGCTCGCTCCACCAGAGAGTCCAGACGCAGCTCCAAGGCAGGGAAGAGTGGAGGAGGGGGTGGAGTTCAGACTGAAAGATTTTCAGGGGAGGTGGACCCACTTTCTTTACAAATGGATCTTCTGAGTCTATCCAGCCAAACACCCAGTTTGACACGCGAGCCACCTGCCTGGCAGAGCCAAGAGCAAGCAGGTGATGTCTATAATTATGAATCCCAATCAGATCCAACTACCAACCCCACCCCTCTCCAGCTTCTTAGCCAGTGCAATGTCAGGACGGCCTATAACCCCACCTGCTCTGGACAGAATAATCAACAGCAAGATCACAGGATCAAGGAGAACGGAGGTTTAAAGAGACCACCCATCTCAGCCATGAAGGGCCACTCTCTGAATGACATGTGGTTCCAACAGCCAGCTCCAGAGGAGTACTATCCACCCAAACTGCGGACCCAAAAGAGCTTCACAGAGGTGTCCCATTGTTCTCAGCACCACAATGGCTTCTCCTCTGACAAGCGCTCCATCAGTTTGCACGGCTTTCAGAGGGACAGGGACAGAGAGGCGGGGCCTCCAGCAGCAACCCAGGTGGCAAGAAGCAGGAACCCCATCAATGCACTTAACTTCACAGAGCAACTGACTCCTCTGGAGCAGACCCCAAGAGGATCCATGGAGTCCCTGGCCCTGTCCAATGCAACAGGCAACTCAGCAGATGGAGGAAAGCGTCAGGAGCACCTTTCTCGTTTCTCGATGCCGGACCTGAGCAAAGACTCTGGAATGAACGTGTCAGAGAAAAGTAACATGGGCACCCTCAACTCCTCAGTGCAGTTTCGTAGCTCTGAGTCTATTCACAGCCTCACCGCCAGTCAGCCCTACATGGAAATGGATCCTCACAGGTCCTCCCAGTACCAGGTGCAGTACTGCGACCCCCCTGGCATGGGTATGGGTATGACTCATTTACCGCCTGGCTTCACATTCCAAGAAGAGGATAGGGTAAGTTTGGTGAGCAGCGCCAACGCTGCCCGCCTGCCACCCATTAGTGAGCGCAGGGTGGGTGGAGgcggaggtggaaggggagccAGTATCCGGTTAGATGCTCCGGAGGAGACTCCTCAGAGGCGCCGgcaccaccaccaccgctccCGTAGATCCCGCCGGTCTCGTTCAGAAAATGCTCTCAACTTGGTAACAGAGCGAAGAGTCAGACCTCAAGAAAGATCCCAGCTGCGTGTCTGTGAGGATTACGATCGTTTCCCGCCGCCAAGGAGCGCCAGGGACCAGTTCGGagtaggaggaggaagagggggaaGATACCAGCCCCAACCCTTCAGGCCATGTCCCAGAACCACTTCAGACCTGACTCTTCAGAACCCTGGGGCCAGCCGGCGCACTGGCTTGAACCAATACTCTTGGGATGATTACGATGACGATGGCTGGTGCTCCACCTGCTCTTCATCCTCCGAATCAGAGGATGAAGGTTACTTCTTGGGTGAGCCAATCCCCAGACCCATCCAGCTGCGCTACCTCAGCAACCAGGAGCTCGTCCATAAGTACAACACAGGTATCGGCGGACCCAACCGCAGTGGGCAGTTACACACCCGCAAACGCAGAAAAAGCAAGAACTGCATTATCTCCTAACATCCTGTCATCTGGTAAAGgaaatgactttttattttttatttttttttccagcttgtGTACACTAACATCTTCCATCTGGaacgtaaaaataaataaaacgcaGTCCATTTATTCAGTGTTGTTGAGTGTTGAATATCATGTAATTGAACGTCAGTGATGAATTACAGTCGGTAAACAGTGAAAAGCAGCagtgtttgcatgtttgttcatgttaaTGTTTCGGAATATCTCCTGAGTATTAAAGCTAACAGTTATGTGTGCAGTTTTATCAAGtcacaacatattttttttaaagctgatgTGCAATTTAGTTTCTTTTTATCATAACTTAATTTCCATGCAGCAAACAAGTGTGCGACGTAGTCAGTTTGGTACAGTTTAGCTTTTTCATGCAATGTGATTTAgatatacaatatactgtactatTGTATTTTAGTTCATAGTATGTACATAGATAAATGAATTAATAATTTCACTTAAATTAAGGAAGTCCATGTAAATATGGTTGTAAATGAGGCCtcacatatttttatattttgtatggATAGAATCATTTATGTATTAAATATCTATAATGTAGagatagaaaatgaaaaacacaacTTATGCATGTTTTATGTGGCTGACCTGGTCCTGCATTTGGAATAAAGGAGAACTTCACTGAG

Function

symbol description
prickle2 Predicted to enable zinc ion binding activity. Predicted to act upstream of or within several processes, including establishment or maintenance of epithelial cell apical/basal polarity; neuron projection development; and trophectodermal cell fate commitment. Located in cytoplasm.

NR:

description
prickle-like protein 2

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K04511 PRICKLE; prickle

RNA

RNA id representative length rna type GC content exon number start site end site
TU49739 False 124 lncRNA 0.57 2 9761047 9772228
XM_039797359.1 False 3593 mRNA 0.51 9 9760233 9856656
XM_039797360.1 True 3817 mRNA 0.51 8 9835060 9856656

Neighbor

gene id symbol gene type direction distance location
adamts9 adamts9 coding upstream 5735 9703011 ~ 9754498 (+)
magi1b magi1 coding upstream 109896 9495284 ~ 9650337 (+)
lrig1 lrig1 coding upstream 361630 9360191 ~ 9398603 (+)
suclg2 suclg2 coding upstream 530252 9104336 ~ 9229981 (+)
tafa4b LOC108244092,LOC101483849,LOC102775681 coding upstream 888067 8832264 ~ 8872166 (+)
psmd6 psmd6 coding downstream 23372 9880028 ~ 9886125 (+)
thoc7 thoc7 coding downstream 64425 9921081 ~ 9926482 (+)
lyar lyar coding downstream 157190 10013846 ~ 10016764 (+)
tmem128 tmem128 coding downstream 160251 10016907 ~ 10029487 (+)
otop1 otop1 coding downstream 172930 10029586 ~ 10038874 (+)
G37064 NA non-coding upstream 26882 9731857 ~ 9733351 (+)
G37023 NA non-coding upstream 349572 9359504 ~ 9410661 (+)
G36990 NA non-coding upstream 529279 9230464 ~ 9230954 (+)
G36991 NA non-coding upstream 529870 9230080 ~ 9230363 (+)
G36988 NA non-coding upstream 720464 9039463 ~ 9039769 (+)
G37104 NA non-coding downstream 71379 9928035 ~ 10006856 (+)
G37112 NA non-coding downstream 101179 9957835 ~ 9962577 (+)
G37163 NA non-coding downstream 195472 10052128 ~ 10052337 (+)
G37177 NA non-coding downstream 348133 10204789 ~ 10206757 (+)
G37186 NA non-coding downstream 400594 10257250 ~ 10260329 (+)
G36744 NA other upstream 1531513 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 2453890 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 2487865 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 2573019 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 3121710 6635280 ~ 6638523 (+)
G37197 NA other downstream 448531 10305187 ~ 10309996 (+)
glrx glrx other downstream 531252 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 1140574 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 1495422 11352078 ~ 11352387 (+)
LOC120557336 LOC103359259,LOC100704408,LOC101476502,LOC102796717,LOC102216118 other downstream 1528528 11385184 ~ 11394398 (+)

Expression


Co-expression Network