G37258


Basic Information

Item Value
gene id G37258
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 10257259 ~ 10270411 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU49993
TTGAATAAGAAAACACTAGAAACAAACATTGGCAAATTAAAAAATAGGATTTGCTTAAGACAATTATACCAAATTAAAAATGGCCCGAAACAAAACATCtttaatacatttcaaaatggTCCCGATACAGTTCATTATAcatcttttttatttcaaaaaagaAGGGGGGGTGGGGAAGAAAATATAATAAGCAAGGCAGCAGACAGgaatgaaatataaataaccTCACATTATGTACAAAAGCGAGTGGGCCTTTGTCCTAGGACAaagtaaaaaaggaaaagaaggcGATGAGTAGACAGCAGTGAGTGGAGCTGGACAGGAGACATAAAGGACATTGGACTCTAGTCTTCTTCCAGTCCGATGCTCTAGAAATGGAGATGTATTTTAATTCTCCGGGGCATTCAAAACACTCCACTGGTGAAAAGCTCCAGGAATAAAGGAATATGAAACACAACTATTTGGTTTCCCTTGGTGATTATGCATAAAATATgcaattgtttttgttgtggggGAAAATTTATGATTTTCTGTTGAACATTCGGGTACCCACAATTGATTACTTGTCATGGATACCACATTTCAGTGATATGGAATTAAATTAAGCCATTTAATCAAgatggcatttatttaaaaagtgaCCTCAATGTTAGTTTGATCTGCACAATTAAGGAATCTATGGATATGTGACTAGGGGGAATGTAAAAGGAAGGATGACTGACCCACTCTTGGTTTTGGCCCTATTGATTTGTCATACAAAGAGGTGTGTCATTGGTCTGCAGGTGACAGTTGAGAAAATACATGCGAGTTGGGAAAATGCAAAGGACTGCCTTTAGGAGGACAGTGGTTGCAGCACATATTTTAcgtaatgtttttgtttttgaaaacctGCAAGTGAGGCACTTTTTTAAGTTCACTATAATAGCAAAATAGTGGGTCTCATGGGTTGGCACAGTGTCATGTTTTGCTGTCAAATTGCAGTGAGACAGTCACTATTCAAGCACACACAAGAAACCCATGTAATTTAAGCACAGACAGAATTGGCAAACAAAAATCCCCTCCTCTGTTAACTAAAGACACGGTAAGTGACAAAGTACATAAATGAAGAACATAATGGCACCTAACGAATAGTGCAGACACTTGTGTGATGAATGGAACCAAAGAAGACCTGAAATGACGATGCACGAACAGCCAACAATTTCAGTGACTGGTCAATTAAAATATCTGCTACTCTAAGTCCCTACAGGGGCCTTAGAGAAGGCTTAACCCTAAAAGAGCTAATATAGTTGCCATATTCTGATTTCAAGGCCATATCATCATTCTGACCTCATCTCTCATTTGGTTCCGTATTTTTAAGGGCTTTGCTTTTGGTGCAAATAGTGCATGTGTGTTCAACAATTAACATCGACGCATTAcctttcctaaaaaaaaaaaatttaaatcagCATATTGATAGTTGTCCACTATCAATAAATTAGGATTGATTGTGCTCCTCGCGTCAGgaaaaagtaatttaataaGGGACTGTTAGTGTGATTTAGACTGTTGTGGGATGCAATTATGTACAAGAATGGGGCTGTTCTCTGttaaaataaacattgaaaTAGCTTGAAAACTcttaaaagaaatatttttaatatgtcAAATTCTGTTCAAATCCATACAAGGCTTTCTGTCTGAATATTCTTCTGGTGGGGAGTCAAACCATTTAAATGTGAGTCAGCTTTGGAGATGAACTCATTTCAATTTGTAAATTTAAACAATTCTGCAATCAGTCATTTCCTGATCTGAACAAGATGACATGACTGACCTGAAGCCCTGCAGTTAACGAACATCATTTATCACAATTGAGTGCATAGCCTCAATGTGACCtcatctgaagaaaaaaaaaaccccactgtAATTCAAGTGTTGGTGTCCTCACAGGACAGccattataaaaagaaaaactgagcaAACATGGCATGGCACACTTCCACTATTGAAGTAACAATGTATCCATTTTTGAGGAATACGTTAGCAACAGCATTCAAATTAAAAGAGACATTCTTCGGCATCAGTGTTCATGGTGGGAAATAAAAAGGGAATCATTCTTTAAAAGTGATAGTACAGCGTAAAGATGCAAGGCTGATATAAAAGATGTAAGAAATGAGTTAGTTCAGGCAGACTCAAAGGACACCCCCTACAGAAAAGAAATGCTCAATACAATCTACAAGAAATACTGACGTGTGTCTGtaaacaagaaaagaaatatgCTTGGTATATAACACGTTGTTTTCTATGATGCAATAATGGGGTTAATTGCGATTGTGTTATTTGTGATTTGGCTTGTCGACATGATCAACATTGCTGCAGATACTGTTAcgatactgtaaataaaatgaaaataattttagaGATTCAACATAAAAGCTTGACCAATTCTCCTTAATGTATGCtgtaaaaaatgtgtatttatttctacttcAGTAACTTCCTGTTATACGGTAGTCCAGTAGTGTGTTGGTTACAGATCCTTGAACAGTAAAATAGCGGTCTTGTACTGAATGTCTAAACATGGTTTCAGACTCCAGAGCTGCATTACCAAGGGAGTGAAGGACTTTGGCACTCAGCAGACAGTGATGTCAAAACAGTCTTCTCTGCTAGCTTAAGCTCTagttacaaacaaacacacacaaatgaatggCTCCTggattttagtgtgtgtgtgtgtgtgtgtgtgtcaacctgAGACTATGAGCTACATCACAGATATTCTGATATCCAATTGTGAACTTTGAACCCCTGAAACTTAAAGGGGATACATTTTCAAGTGGCTCGATAGATGGAACTAAATATGTGTCAAGACAAAttgctctgcttgtgtgtgtgtgtgtgtgtgtacactgtaTGAATGTCTAGGAGTACAAAAAACTGTCCgatttttttctgtaaatgttTAAGGTTCTGCTACAACAGACATTGCTACAGCATGGCTCTGGCCAAGCCAACATGTTTTAAGTCTCTGTCcctaaaaagtaaaaaacaaaaatccaaacATCATTGCCTCGACTCTGGATTTTTTGCATTAGCCTCCAAAG
>TU49994
TTGAATAAGAAAACACTAGAAACAAACATTGGCAAATTAAAAAATAGGATTTGCTTAAGACAATTATACCAAATTAAAAATGGCCCGAAACAAAACATCtttaatacatttcaaaatggTCCCGATACAGTTCATTATAcatcttttttatttcaaaaaagaAGGGGGGGTGGGGAAGAAAATATAATAAGCAAGGCAGCAGACAGgaatgaaatataaataaccTCACATTATGTACAAAAGCGAGTGGGCCTTTGTCCTAGGACAaagtaaaaaaggaaaagaaggcGATGAGTAGACAGCAGTGAGTGGAGCTGGACAGGAGACATAAAGGACATTGGACTCTAGTCTTCTTCCAGTCCGATGCTCTAGAAATGGAGATGTATTTTAATTCTCCGGGGCATTCAAAACACTCCACTGGTGAAAAGCTCCAGGAATAAAGGAATATGAAACACAACTATTTGGTTTCCCTTGGTGATTATGCATAAAATATgcaattgtttttgttgtggggGAAAATTTATGATTTTCTGTTGAACATTCGGGTACCCACAATTGATTACTTGTCATGGATACCACATTTCAGTGATATGGAATTAAATTAAGCCATTTAATCAAgatggcatttatttaaaaagtgaCCTCAATGTTAGTTTGATCTGCACAATTAAGGAATCTATGGATATGTGACTAGGGGGAATGTAAAAGGAAGGATGACTGACCCACTCTTGGTTTTGGCCCTATTGATTTGTCATACAAAGAGGTGTGTCATTGGTCTGCAGGTGACAGTTGAGAAAATACATGCGAGTTGGGAAAATGCAAAGGACTGCCTTTAGGAGGACAGTGGTTGCAGCACATATTTTAcgtaatgtttttgtttttgaaaacctGCAAGTGAGGCACTTTTTTAAGTTCACTATAATAGCAAAATAGTGGGTCTCATGGGTTGGCACAGTGTCATGTTTTGCTGTCAAATTGCAGTGAGACAGTCACTATTCAAGCACACACAAGAAACCCATGTAATTTAAGCACAGACAGAATTGGCAAACAAAAATCCCCTCCTCTGTTAACTAAAGACACGGTAAGTGACAAAGTACATAAATGAAGAACATAATGGCACCTAACGAATAGTGCAGACACTTGTGTGATGAATGGAACCAAAGAAGACCTGAAATGACGATGCACGAACAGCCAACAATTTCAGTGACTGGTCAATTAAAATATCTGCTACTCTAAGTCCCTACAGGGGCCTTAGAGAAGGCTTAACCCTAAAAGAGCTAATATAGTTGCCATATTCTGATTTCAAGGCCATATCATCATTCTGACCTCATCTCTCATTTGGTTCCGTATTTTTAAGGGCTTTGCTTTTGGTGCAAATAGTGCATGTGTGTTCAACAATTAACATCGACGCATTAcctttcctaaaaaaaaaaaatttaaatcagCATATTGATAGTTGTCCACTATCAATAAATTAGGATTGATTGTGCTCCTCGCGTCAGgaaaaagtaatttaataaGGGACTGTTAGTGTGATTTAGACTGTTGTGGGATGCAATTATGTACAAGAATGGGGCTGTTCTCTGttaaaataaacattgaaaTAGCTTGAAAACTcttaaaagaaatatttttaatatgtcAAATTCTGTTCAAATCCATACAAGGCTTTCTGTCTGAATATTCTTCTGGTGGGGAGTCAAACCATTTAAATGTGAGTCAGCTTTGGAGATGAACTCATTTCAATTTGTAAATTTAAACAATTCTGCAATCAGTCATTTCCTGATCTGAACAAGATGACATGACTGACCTGAAGCCCTGCAGTTAACGAACATCATTTATCACAATTGAGTGCATAGCCTCAATGTGACCtcatctgaagaaaaaaaaaaccccactgtAATTCAAGTGTTGGTGTCCTCACAGGACAGccattataaaaagaaaaactgagcaAACATGGCATGGCACACTTCCACTATTGAAGTAACAATGTATCCATTTTTGAGGAATACGTTAGCAACAGCATTCAAATTAAAAGAGACATTCTTCGGCATCAGTGTTCATGGTGGGAAATAAAAAGGGAATCATTCTTTAAAAGTGATAGTACAGCGTAAAGATGCAAGGCTGATATAAAAGATGTAAGAAATGAGTTAGTTCAGGCAGACTCAAAGGACACCCCCTACAGAAAAGAAATGCTCAATACAATCTACAAGAAATACTGACGTGTGTCTGtaaacaagaaaagaaatatgCTTGGTATATAACACGTTGTTTTCTATGATGCAATAATGGGGTTAATTGCGATTGTGTTATTTGTGATTTGGCTTGTCGACATGATCAACATTGCTGCAGATACTGTTAcgatactgtaaataaaatgaaaataattttagaGATTCAACATAAAAGCTTGACCAATTCTCCTTAATGTATGCtgtaaaaaatgtgtatttatttctacttcAGTAACTTCCTGTTATACGGTAGTCCAGTAGTGTGTTGGTTACAGATCCTTGAACAGTAAAATAGCGGTCTTGTACTGAATGTCTAAACATGGTTTCAGACTCCAGAGCTGCATTACCAAGGGAGTGAAGGACTTTGGCACTCAGCAGACAGTGATGTCAAAACAGTCTTCTCTGCTAGCTTAAGCTCTagttacaaacaaacacacacaaatgaatggCTCCTggattttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacactgtaTGAATGTCTAGGAGTACAAAAAACTGTCCgatttttttctgtaaatgttTAAGGTTCTGCTACAACAGACATTGCTACAGCATGGCTCTGGCCAAGCCAACATGTTTTAAGTCTCTGTCcctaaaaagtaaaaaacaaaaatccaaacATCATTGCCTCGACTCTGGATTTTTTGCATTAGCCTCCAAAG
>TU49998
gtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtacactgtaTGAATGTCTAGGAGTACAAAAAACTGTCCgatttttttctgtaaatgttTAAGGTTCTGCTACAACAGACATTGCTACAGCATGGCTCTGGCCAAGCCAACATGTTTTAAGTCTCTGTCcctaaaaagtaaaaaacaaaaatccaaacATCATTGCCTCGACTCTGGATTTTTTGCATTAGCCTCCAAAG

Function

NR:

description
PREDICTED: nuclear receptor corepressor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49993 True 3080 lncRNA 0.37 2 10257259 10260360
TU49994 False 2933 lncRNA 0.37 2 10257259 10260360
TU49998 False 230 lncRNA 0.40 2 10257259 10270411

Neighbor

gene id symbol gene type direction distance location
wdr1 wdr1,LOC102791765 coding downstream 41127 10204986 ~ 10216132 (-)
slc2a9l2 slc2a9 coding downstream 55508 10101729 ~ 10201751 (-)
zbtb49 zbtb49 coding downstream 243540 10007330 ~ 10013719 (-)
LOC120558214 synpr,LOC104965753 coding downstream 261504 9967082 ~ 9995755 (-)
LOC120558233 NA coding downstream 294716 9957831 ~ 9962543 (-)
cast NA coding upstream 24124 10294535 ~ 10333383 (-)
rfesd rfesd coding upstream 151433 10421844 ~ 10424787 (-)
ube2r2 ube2r2 coding upstream 163789 10434200 ~ 10442069 (-)
nop56 nop56 coding upstream 220905 10491316 ~ 10497248 (-)
LOC120558246 NA coding upstream 221879 10492290 ~ 10492357 (-)
G37260 ptpra non-coding downstream 4706 10252158 ~ 10252553 (-)
G37165 NA non-coding downstream 196852 10059804 ~ 10060407 (-)
G37159 NA non-coding downstream 212824 10044168 ~ 10044435 (-)
G37158 NA non-coding downstream 213437 10042247 ~ 10043822 (-)
G37146 NA non-coding downstream 240535 10015379 ~ 10016724 (-)
G37245 NA non-coding upstream 22687 10293098 ~ 10302511 (-)
G37276 NA non-coding upstream 39698 10310109 ~ 10311154 (-)
G37305 dcaf12,LOC102784774 non-coding upstream 183550 10453961 ~ 10456420 (-)
G37321 NA non-coding upstream 218389 10488800 ~ 10490052 (-)
G37361 NA non-coding upstream 281882 10552293 ~ 10553381 (-)
LOC120556768 LOC104965754,LOC103359409,LOC102210396,LOC101479743,LOC102082439,LOC102300053 other downstream 251086 9998996 ~ 10006173 (-)
G37045 lrig1 other downstream 861689 9394739 ~ 9395570 (-)
LOC120558079 fam19a1,LOC101482978,LOC107385433,LOC108244096,LOC103386186,LOC106518519,LOC101163164,LOC102209545 other downstream 1223592 8906439 ~ 9033667 (-)
mustn1b mustn1,LOC107385427 other downstream 1634437 8619087 ~ 8622822 (-)
LOC120557774 ucn2,LOC104952568,LOC108241195,LOC106518500,LOC100704776 other downstream 1842326 8412726 ~ 8414933 (-)
rhobtb3 glrx,rhobtb3,LOC102786935 other upstream 117506 10387917 ~ 10419906 (-)
tpgs2 tpgs2 other upstream 262115 10532526 ~ 10536353 (-)
fam219aa fam219a,LOC101484940,LOC100701621 other upstream 661824 10932235 ~ 10943639 (-)
LOC120557925 tmem233 other upstream 712659 10983070 ~ 10988818 (-)
G37432 LOC106915059,LOC106958204,LOC102221633,LOC103464975,LOC100700174,LOC101482873,LOC102210230 other upstream 780888 11051299 ~ 11053085 (-)

Expression


Co-expression Network