G37527 (evc2)


Basic Information

Item Value
gene id G37527
gene name evc2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 11355629 ~ 11356360 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU50349
TTGACAGGCAAAGTAATCGTGCTGAAGACTCTTGGCTGTACTCCTCTCCAACTCGCCCATCCTGGTGGCCTCCTCCAGTTCTTCAGAGAAGATCTTGTGCAACTCCACCCGGCGCCACTCGATGATCTGCCTCTGGACCTTGCCTGAGGCTTCTTCGTGTCGGACCAACAGAATGCGCTGGAGCTGACTCTGGCTCAGCTTGTGCAGCTTCTCCAGGAGGACGCTGCAGTGGAGGAGCTCCTGGTAACATTACAAAATGAGGTTTTACAGTAGGGATGGTGTGTCATGAAAGCAATAAACTCTCGGAATGCTACTTCCCTAGCAAATTAAACAAAGGACTTTTGAGGACCTGTTGGTCTGCGTGTTGACACAGCAGCTCGGCCTGGGCCTTCTCAGCAGCTTCTCTGCGGTGCTCTGCTTCCATTTCTTCCCGAGTCTCCAGGTTACACTGACCAGCCAGAGCAGCCATGCGGGCCCCTCGCTCCTCCTTCAGCCGACCCTCCATGCCCAGCATCTGTCCGTGGAGCACACTGAGGAGTCTCTGCTGGGCCTGGGCGCTGCACTGGCCCCGGGAACGCAGGCCGCCCAGCAGGGAGGACATCACATCCTTGTAGATCTGAATTCGGGTTGCCTCCAGGTTGTTGGTGGCATGCAGCAGTGTGGACATTTCAAGGCTTGCAGGGATAAAATGCAGAGTAAGCAGGGTAAACCTGTACATTGAGAGTTTTCAAT

Function

symbol description
evc2 Predicted to be involved in smoothened signaling pathway. Located in nucleus. Implicated in Ellis-Van Creveld syndrome and Weyers acrofacial dysostosis.

NR:

description
PREDICTED: limbin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50349 True 732 lncRNA 0.55 1 11355629 11356360

Neighbor

gene id symbol gene type direction distance location
msx1a msx1 coding upstream 22983 11330556 ~ 11332646 (+)
LOC120558115 NA coding upstream 89559 11263510 ~ 11266070 (+)
LOC120558172 LOC104927939,LOC104961953,LOC100699369,LOC102798792,LOC103359250 coding upstream 112264 11236707 ~ 11243365 (+)
aggf1 aggf1 coding upstream 129047 11219389 ~ 11226582 (+)
r3hcc1 LOC104945372 coding upstream 187823 11156708 ~ 11167806 (+)
LOC120557333 evc coding downstream 5046 11361406 ~ 11375812 (+)
LOC120557335 LOC103359258,LOC101476783 coding downstream 20175 11376535 ~ 11382180 (+)
myl9b LOC100697131,LOC101062217,LOC105901900,LOC103386121,LOC106565219 coding downstream 537230 11893590 ~ 11905754 (+)
LOC120557971 kiaa1755 coding downstream 724745 12081105 ~ 12111841 (+)
tgm2b tgm2,LOC103354993 coding downstream 757648 12114008 ~ 12127710 (+)
G37526 NA non-coding upstream 886 11354276 ~ 11354743 (+)
G37524 evc2 non-coding upstream 5856 11349550 ~ 11349773 (+)
G37523 NA non-coding upstream 6261 11349136 ~ 11349368 (+)
G37522 NA non-coding upstream 7958 11347086 ~ 11347671 (+)
G37521 NA non-coding upstream 10570 11344740 ~ 11345059 (+)
G37528 NA non-coding downstream 3413 11359773 ~ 11360248 (+)
G37553 NA non-coding downstream 51616 11407976 ~ 11416351 (+)
G37560 NA non-coding downstream 65163 11421523 ~ 11421722 (+)
G37561 NA non-coding downstream 65882 11422242 ~ 11422899 (+)
G37567 NA non-coding downstream 158402 11514762 ~ 11515088 (+)
G37525 evc2 other upstream 3242 11352078 ~ 11352387 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other upstream 342720 10997230 ~ 11012909 (+)
glrx glrx other upstream 959442 10387908 ~ 10396187 (+)
G37197 NA other upstream 1045633 10305187 ~ 10309996 (+)
prickle2b prickle2 other upstream 1498973 9760233 ~ 9856656 (+)
LOC120557336 LOC103359259,LOC100704408,LOC101476502,LOC102796717,LOC102216118 other downstream 28824 11385184 ~ 11394398 (+)
G37597 NA other downstream 423818 11780178 ~ 11805394 (+)
G37714 NA other downstream 896706 12253066 ~ 12254974 (+)
LOC120557851 krt18,LOC105931717,LOC101469154 other downstream 918400 12274760 ~ 12278624 (+)
G37730 NA other downstream 1029811 12386171 ~ 12387175 (+)

Expression


Co-expression Network