G37778


Basic Information

Item Value
gene id G37778
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 12661771 ~ 12661985 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU50715
CGGAAATGCGGCTCGTGTTGACGTTCCGTGTGCTTCCGTCGCATTTGGTCAGTCCCATAAACACATGAGTGCTTCACGGGTTTGCAAAAATCGTCCTTCACTGACTCCCCATCAGCAACCGTCGCCGCGGTTTATGTCACAGAACGAGTTGTACCCGTAAAaaggatttgtttttaaaatgccacgtgtcatttttttaaaacgcGAACAATATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50715 True 215 lncRNA 0.47 1 12661771 12661985

Neighbor

gene id symbol gene type direction distance location
hipk1b LOC103354978 coding upstream 79367 12561829 ~ 12582404 (+)
LOC120557182 camta1 coding upstream 101591 12508013 ~ 12560180 (+)
phf13 phf13 coding upstream 165536 12488697 ~ 12496235 (+)
LOC120557555 NA coding upstream 222396 12394585 ~ 12439375 (+)
LOC120557854 LOC103386109,LOC100136371,LOC104937510,LOC102227505,LOC103464934 coding upstream 291125 12339555 ~ 12370646 (+)
LOC120557860 NA coding downstream 49500 12711485 ~ 12715490 (+)
mapk14b LOC104939458,LOC103028137,LOC108436315,LOC100692416,LOC103386138 coding downstream 92526 12754511 ~ 12776399 (+)
srpk1b LOC102298380,LOC102778566,LOC102206670 coding downstream 114886 12776871 ~ 12809790 (+)
cpne5b LOC103464903,LOC107101079,LOC106917389,LOC106955215,LOC103144351 coding downstream 263728 12925713 ~ 13060775 (+)
gnl3 NA coding downstream 509408 13171393 ~ 13194901 (+)
G37769 NA non-coding upstream 55109 12603798 ~ 12606662 (+)
G37768 NA non-coding upstream 62100 12599440 ~ 12599671 (+)
G37761 NA non-coding upstream 75960 12584657 ~ 12585811 (+)
G37742 NA non-coding upstream 211223 12450052 ~ 12450548 (+)
G37729 NA non-coding upstream 276125 12385390 ~ 12385646 (+)
G37783 LOC103386132,LOC107099520,LOC105931731,LOC106513340 non-coding downstream 19143 12681128 ~ 12682749 (+)
G37882 LOC104938800,LOC101487137,LOC105931744,LOC100700351,LOC104958030 non-coding downstream 35240 12697225 ~ 12700679 (+)
G37966 NA non-coding downstream 252085 12914070 ~ 12914413 (+)
G37970 NA non-coding downstream 401349 13063334 ~ 13064366 (+)
G37978 NA non-coding downstream 408186 13070171 ~ 13071870 (+)
G37730 NA other upstream 274596 12386171 ~ 12387175 (+)
LOC120557851 krt18,LOC105931717,LOC101469154 other upstream 383147 12274760 ~ 12278624 (+)
G37714 NA other upstream 406797 12253066 ~ 12254974 (+)
G37597 NA other upstream 856377 11780178 ~ 11805394 (+)
LOC120557336 LOC103359259,LOC100704408,LOC101476502,LOC102796717,LOC102216118 other upstream 1267373 11385184 ~ 11394398 (+)
cdab cda,LOC103354969,LOC106590862 other downstream 54175 12716160 ~ 12719493 (+)
b3galt6 b3galt6 other downstream 72541 12734526 ~ 12741048 (+)
tmem167b tmem167b other downstream 87223 12749208 ~ 12752285 (+)
kif21b kif21b other downstream 163531 12825516 ~ 12907935 (+)
spcs1 spcs1 other downstream 543484 13205469 ~ 13208258 (+)

Expression


Co-expression Network