tmem167b (tmem167b)


Basic Information

Item Value
gene id tmem167b
gene name tmem167b
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 12749208 ~ 12752285 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU50883
agccagTGAAACCGGAAATGTCAACCGAGTGACTGCGAAGCGAATAAGAGACTGCATTATTATAACTCTAGCTACTTTATATAACATGATGGATTGCTAATTTAAAGGAAGAAGCAGTCATAATAAATCGTCAGAGAGCAAACTGCGAATATGACAAATGTGTACTCTTTTGATGGCATCCTGGTGTTCGGCCTGCTGTTCATCTGCACTTGTGCATACCTCAAAAAGGTGCCTCGCCTCAACAACTGGCTGCTATCAGAGAAGAAAGGAGTGTGGGGCGTCTTCTATAAAGCTGCGGTAATTGGGACGCGGCTTCACATTGCCGTGGCAATTTCCTGTTTGGGCATGGCGTTCTACATTGTCTTCTTGAAATGATAGAGTCAGACTGGACTAAAAAGGACCAGACGGGTGCAGGCGGGGGATGGACTCCTCTCTGTGGTCATGTACTAATCCTTGTTGGGGAGAAACCTCTTGGATTACGTGACTGATGAAACCCCATTGGCCCTGTGGATCCATGTGAAAGACTAGCCAGTGCTTCCCCCTTCTGGTGACTGGGTACATAATTCCTCCCTTGATGTGTGTGCACACTGCACTACAGACATGACGGGCATCCGGAATCAACTCCACAGTTGTTACAGAGGAGAGAGCCAGTTCGGTCTCTTTTTATCATTGTATTGTAGGGTAACACTGTTGGTTGTCTCCATCCACACCCCATGCATATTTATATTAAAGGATGCAGAAGATTGAAGGGCAGTGTGTGCATTGTACCGTATACCTGTATACAACCTAAAATTAGCCTAGCTGTATATATTTGGAAAAAGATATGACCAATAGAGATTTGCCAGAGGTTATGTGTGATCAAACTGAAAATGATCTATTCTGCTTGCTCCCAGCTATGCTGTTTTTTCTGTATCACCTCTTGTGTCAAGGGTGAGGGGAAGATAAACAAAGCTAATATATAAAGATGTTCTTGTGtactactttacttttttttgggATCTCTTACTTTTCCTCAACAGTGCTGTTTGGCATCTCTTAAGCTTTGTTTTAGGTTTGAAATACACATTTTGCACAGGTGTATGTTGTATTTACGACATTGCCATCTAATAATAGTTAACATGTCACAAATTGTTACAAATTGAACTGTAAGACACGTAGGATTCAAAGTTCTACCACAACTGTAGAGTATCGCAGAGAGAATAATTTTTCGAAGAGTCGTATCTCAAcatactgttaaaaaaatataatagcTATATCAGACCCGCCTGAATATTTAAATGCAATGCCAAATAGGGACGGTGCTTCTCATGTCTATAAATTACATACTGTTATTCTGAGTTTAATTCTGCCAccttatttcatatttttaaaagAAGACATTGTTTTGATAGGGGATGCAATGCAATTTTCAGTAAAACATTAACCAC
>XM_039799078.1
aagaagaagaagaagccagTGAAACCGGAAATGTCAACCGAGTGACTGCGAAGCGAATAAGAGACTGCATTATTATAACTCTAGCTACTTTATATAACATGATGGATTGCTAATTTAAAGGAAGAAGCAGTCATAATAAATCGTCAGAGAGCAAACTGCGAATATGACAAATGTGTACTCTTTTGATGGCATCCTGGTGTTCGGCCTGCTGTTCATCTGCACTTGTGCATACCTCAAAAAGGTGCCTCGCCTCAACAACTGGCTGCTATCAGAGAAGAAAGGAGTGTGGGGCGTCTTCTATAAAGCTGCGGTAATTGGGACGCGGCTTCACATTGCCGTGGCAATTTCCTGTTTGGGCATGGCGTTCTACATTGTCTTCTTGAAATGATAGAGTCAGACTGGACTAAAAAGGACCAGACGGGTGCAGGCGGGGGATGGACTCCTCTCTGTGGTCATGTACTAATCCTTGTTGGGGAGAAACCTCTTGGATTACGTGACTGATGAAACCCCATTGGCCCTGTGGATCCATGTGAAAGACTAGCCAGTGCTTCCCCCTTCTGGTGACTGGGTACATAATTCCTCCCTTGATGTGTGTGCACACTGCACTACAGACATGACGGGCATCCGGAATCAACTCCACAGTTGTTACAGAGGAGAGAGCCAGTTCGGTCTCTTTTTATCATTGTATTGTAGGGTAACACTGTTGGTTGTCTCCATCCACACCCCATGCATATTTATATTAAAGGATGCAGAAGATTGAAGGGCAGTGTGTGCATTGTACCGTATACCTGTATACAACCTAAAATTAGCCTAGCTGTATATATTTGGAAAAAGATATGACCAATAGAGATTTGCCAGAGGTTATGTGTGATCAAACTGAAAATGATCTATTCTGCTTGCTCCCAGCTATGCTGTTTTTTCTGTATCACCTCTTGTGTCAAGGGTGAGGGGAAGATAAACAAAGCTAATATATAAAGATGTTCTTGTGtactactttacttttttttgggATCTCTTACTTTTCCTCAACAGTGCTGTTTGGCATCTCTTAAGCTTTGTTTTAGGTTTGAAATACACATTTTGCACAGGTGTATGTTGTATTTACGACATTGCCATCTAATAATAGTTAACATGTCACAAATTGTTACAAATTGAACTGTAAGACACGTAGGATTCAAAGTTCTACCACAACTGTAGAGTATCGCAGAGAGAATAATTTTTCGAAGAGTCGTATCTCAAcatactgttaaaaaaatataatagcTATATCAGACCCGCCTGAATATTTAAATGCAATGCCAAATAGGGACGGTGCTTCTCATGTCTATAAATTACATACTGTTATTCTGAGTTTAATTCTGCCAccttatttcatatttttaaaagAAGACATTGTTTTGATAGGGGATGCAATGCAATTTTCAGTAAAACATTAACCACACAA

Function

symbol description
tmem167b Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Orthologous to human TMEM167B (transmembrane protein 167B).

NR:

description
PREDICTED: protein kish-B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50883 False 1427 lncRNA 0.41 3 12749221 12752281
XM_039799078.1 True 1444 mRNA 0.40 3 12749208 12752285

Neighbor

gene id symbol gene type direction distance location
LOC120557860 NA coding upstream 33718 12711485 ~ 12715490 (+)
pusl1 pusl1,LOC102782008 coding upstream 74249 12660513 ~ 12674959 (+)
hipk1b LOC103354978 coding upstream 166804 12561829 ~ 12582404 (+)
LOC120557182 camta1 coding upstream 189028 12508013 ~ 12560180 (+)
phf13 phf13 coding upstream 252973 12488697 ~ 12496235 (+)
mapk14b LOC104939458,LOC103028137,LOC108436315,LOC100692416,LOC103386138 coding downstream 2226 12754511 ~ 12776399 (+)
srpk1b LOC102298380,LOC102778566,LOC102206670 coding downstream 24586 12776871 ~ 12809790 (+)
cpne5b LOC103464903,LOC107101079,LOC106917389,LOC106955215,LOC103144351 coding downstream 173428 12925713 ~ 13060775 (+)
gnl3 NA coding downstream 419108 13171393 ~ 13194901 (+)
LOC120558254 NA coding downstream 439493 13191778 ~ 13191911 (+)
G37882 LOC104938800,LOC101487137,LOC105931744,LOC100700351,LOC104958030 non-coding upstream 48529 12697225 ~ 12700679 (+)
G37783 LOC103386132,LOC107099520,LOC105931731,LOC106513340 non-coding upstream 66459 12681128 ~ 12682749 (+)
G37778 NA non-coding upstream 87223 12661771 ~ 12661985 (+)
G37769 NA non-coding upstream 142546 12603798 ~ 12606662 (+)
G37768 NA non-coding upstream 149537 12599440 ~ 12599671 (+)
G37966 NA non-coding downstream 161785 12914070 ~ 12914413 (+)
G37970 NA non-coding downstream 311049 13063334 ~ 13064366 (+)
G37978 NA non-coding downstream 317886 13070171 ~ 13071870 (+)
G37980 NA non-coding downstream 319689 13071974 ~ 13072825 (+)
LOC120556864 NA non-coding downstream 323134 13075419 ~ 13079887 (+)
b3galt6 b3galt6 other upstream 8160 12734526 ~ 12741048 (+)
cdab cda,LOC103354969,LOC106590862 other upstream 29715 12716160 ~ 12719493 (+)
G37730 NA other upstream 362033 12386171 ~ 12387175 (+)
LOC120557851 krt18,LOC105931717,LOC101469154 other upstream 470584 12274760 ~ 12278624 (+)
G37714 NA other upstream 494234 12253066 ~ 12254974 (+)
kif21b kif21b other downstream 73231 12825516 ~ 12907935 (+)
spcs1 spcs1 other downstream 453184 13205469 ~ 13208258 (+)
vamp3 vamp3 other downstream 544091 13296376 ~ 13303615 (+)
per3 per3 other downstream 553130 13305415 ~ 13329332 (+)
mdm4 mdm4 other downstream 567399 13319684 ~ 13372372 (+)

Expression


Co-expression Network