G37970


Basic Information

Item Value
gene id G37970
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 13063334 ~ 13064366 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU50974
AAACTAATTCTAAATCTTACTTCATCTTTTTCCATCTTTGTCACTCTTTCCCCGCAGCCTTTGTTCTTCTTAGTATGATTGTTCCAGTTTCACTCAGTTTTGTTTGCTACTTAACCTTCATGTGGCCCTCATTGGTGTGGAGAGTAAACAAACGCAAAAACAATGCTAAAATACAATAGACTGTAAAAGGTGTCCTTTCCTTTTAAACTGACAAAATGAGGCAGAGGCAGAATTAATCTAAGGTTCTATTCAAATGTCTAATGTAGCAAACTAAAGGCCTTAACAAAGTGAAAGGTAGTCACTGCATCTCATTTAGTCCTTTATTAAAAATCAGCTCAGGTGGATAAGTATGGCTCTTGGGTGGATAAGATGAAATTATTTGAGGGTGTTCAAAATGGCAAACAGCTCTGTGCTTGTGAATCTTTGTGTGTTCAAAGAGGGGAAACTGTTAACAGTGGAGTGGACTGCTATTAGAATGTAAAGTGTATAAACAGCTGGTTTGCATATAGATCCCAACAGCACTTTATCCTTGCGAGGAGTGCTCATTGTACATGATGGATATGTTTTTAGGAATATTGCTGTATtgaagaaatgtatttatttttggagTTTGTATGACAAGCCATCGCTCCTGTAGTCTAAGTCACTAAGGTGACCTCTTAACACCCTAAAATGTATAAGTGTGATGGATCGACTGCATGTTTTCTTGGGGTGGCATCAAAGAGTGCCGTCATCTGTATAATAGGAACCAGCCCAAACAGATTACATGCATGTCAGTGCCAAACACGGCAGTAAGCTCTGTGGACTGTTTGCTATTTCCTATCTCTTGTGCCCGGCTCTCCAAACATTTGTCTCACCAGTGGTTATAAACCGTAGCAAAATTAGCATGTTACAGTTAAcgcatttttttattattcttttttgtcTAATCCCACTATTTCTGTTTATATCTCTTCAGTTTTCTGATTTGCATGACTCCCTACTTTCCTTTAAATGGGTTTTTAAAATTGTACATGATTATTGTCATATGGTG

Function

GO:

id name namespace
GO:0046034 ATP metabolic process biological_process
GO:0022900 electron transport chain biological_process
GO:0017144 drug metabolic process biological_process
GO:0009123 nucleoside monophosphate metabolic process biological_process
GO:0009126 purine nucleoside monophosphate metabolic process biological_process
GO:0009141 nucleoside triphosphate metabolic process biological_process
GO:0009144 purine nucleoside triphosphate metabolic process biological_process
GO:0009161 ribonucleoside monophosphate metabolic process biological_process
GO:0009167 purine ribonucleoside monophosphate metabolic process biological_process
GO:0015985 energy coupled proton transport, down electrochemical gradient biological_process
GO:0015986 ATP synthesis coupled proton transport biological_process
GO:0009199 ribonucleoside triphosphate metabolic process biological_process
GO:0009205 purine ribonucleoside triphosphate metabolic process biological_process
GO:0005746 mitochondrial respirasome cellular_component
GO:0070469 respirasome cellular_component
GO:0005739 mitochondrion cellular_component

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU50974 True 1033 lncRNA 0.38 1 13063334 13064366

Neighbor

gene id symbol gene type direction distance location
cpne5b LOC103464903,LOC107101079,LOC106917389,LOC106955215,LOC103144351 coding upstream 2559 12925713 ~ 13060775 (+)
srpk1b LOC102298380,LOC102778566,LOC102206670 coding upstream 253544 12776871 ~ 12809790 (+)
mapk14b LOC104939458,LOC103028137,LOC108436315,LOC100692416,LOC103386138 coding upstream 286935 12754511 ~ 12776399 (+)
LOC120557860 NA coding upstream 347844 12711485 ~ 12715490 (+)
pusl1 pusl1,LOC102782008 coding upstream 388375 12660513 ~ 12674959 (+)
gnl3 NA coding downstream 107027 13171393 ~ 13194901 (+)
LOC120558254 NA coding downstream 127412 13191778 ~ 13191911 (+)
LOC120558251 NA coding downstream 128881 13193247 ~ 13193320 (+)
camk1b NA coding downstream 154977 13219343 ~ 13264340 (+)
trnar-acg_15 NA coding downstream 221873 13286239 ~ 13286311 (+)
G37966 NA non-coding upstream 148921 12914070 ~ 12914413 (+)
G37882 LOC104938800,LOC101487137,LOC105931744,LOC100700351,LOC104958030 non-coding upstream 362655 12697225 ~ 12700679 (+)
G37783 LOC103386132,LOC107099520,LOC105931731,LOC106513340 non-coding upstream 380585 12681128 ~ 12682749 (+)
G37778 NA non-coding upstream 401349 12661771 ~ 12661985 (+)
G37769 NA non-coding upstream 456672 12603798 ~ 12606662 (+)
G37978 NA non-coding downstream 5805 13070171 ~ 13071870 (+)
G37980 NA non-coding downstream 7608 13071974 ~ 13072825 (+)
LOC120556864 NA non-coding downstream 11053 13075419 ~ 13079887 (+)
G38001 NA non-coding downstream 51288 13115654 ~ 13116572 (+)
LOC120556887 NA non-coding downstream 711415 13775781 ~ 13777150 (+)
kif21b kif21b other upstream 155399 12825516 ~ 12907935 (+)
tmem167b tmem167b other upstream 311049 12749208 ~ 12752285 (+)
b3galt6 b3galt6 other upstream 322286 12734526 ~ 12741048 (+)
cdab cda,LOC103354969,LOC106590862 other upstream 343841 12716160 ~ 12719493 (+)
G37730 NA other upstream 676159 12386171 ~ 12387175 (+)
spcs1 spcs1 other downstream 141103 13205469 ~ 13208258 (+)
vamp3 vamp3 other downstream 232010 13296376 ~ 13303615 (+)
per3 per3 other downstream 241049 13305415 ~ 13329332 (+)
mdm4 mdm4 other downstream 255318 13319684 ~ 13372372 (+)
tfeb tfeb other downstream 392563 13456929 ~ 13528319 (+)

Expression


Co-expression Network