G37978


Basic Information

Item Value
gene id G37978
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 13070171 ~ 13071870 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU50982
GATAAACGCAGTGTTTAAGCGCATCACAACCATGCCTCTACAATCAAGGTTTCTGTCGCAGCTTGACCTTCTCTCTGAAAGATTGCTGAGAGTGTTTGCAAAGCGACCGGGGGAGCAGAGCAAAAAACTGAAAGACATAGCTGCCATGATGACAGGATGACATTGATGCCAGAAGGGAGTCCCTCATTAAAGGACTCTGCATCTATCTGAATGAGAATCCTGACGTCTTGGTGCAGGAGTACATGGACATGACTGAGGCCACTGCACTGAGTGCCATCGAGAAAACTACAGTGGGAATCTACGCACCAGAGACGCCAGGCAATGACTTTTCTGATGTTGGCATCATCATCGAGGGTGTGGTGGTTCTTCCTCAAGATCTGGATAATGTGGCCCTTGCAACAGCCTTGCTATTTGGACTTTTTTACTCTTTGAACATGAGGTATCCGTCATAGCTCTGCTACACTTTAGAAGTGATTCAAAAGGTGGTAATGGAGTTGGATGTGACTCAACTCTCGAGGAAAGCccaaagcttaaagacaaaactgctCCAGTAAGGAGAGCTCACTGTTGTTGTGCACGTGAGGCTTAAGGTGGAATTTCCAGATGAACAATCAGCAACCCACAACAAATCACAGCATCCATTGTTAAGTCcaccaacaaaaaagaaagtgtCAGTCGGTTCATACTTCTCCTTCACCAAGTGTTTATTCCTTAAAGGTGCTCTGTGATGTGActcgttttttaggctacaacatgttttgtcacatacagcaaacatctcctccgtatttgctagctgcctgtcccctgaacacactttcaaaaaaaaaaatgcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50982 True 836 lncRNA 0.45 3 13070171 13071870

Neighbor

gene id symbol gene type direction distance location
cpne5b LOC103464903,LOC107101079,LOC106917389,LOC106955215,LOC103144351 coding upstream 9396 12925713 ~ 13060775 (+)
srpk1b LOC102298380,LOC102778566,LOC102206670 coding upstream 260381 12776871 ~ 12809790 (+)
mapk14b LOC104939458,LOC103028137,LOC108436315,LOC100692416,LOC103386138 coding upstream 293772 12754511 ~ 12776399 (+)
LOC120557860 NA coding upstream 354681 12711485 ~ 12715490 (+)
pusl1 pusl1,LOC102782008 coding upstream 395212 12660513 ~ 12674959 (+)
gnl3 NA coding downstream 99523 13171393 ~ 13194901 (+)
LOC120558254 NA coding downstream 119908 13191778 ~ 13191911 (+)
LOC120558251 NA coding downstream 121377 13193247 ~ 13193320 (+)
camk1b NA coding downstream 147473 13219343 ~ 13264340 (+)
trnar-acg_15 NA coding downstream 214369 13286239 ~ 13286311 (+)
G37970 NA non-coding upstream 5805 13063334 ~ 13064366 (+)
G37966 NA non-coding upstream 155758 12914070 ~ 12914413 (+)
G37882 LOC104938800,LOC101487137,LOC105931744,LOC100700351,LOC104958030 non-coding upstream 369492 12697225 ~ 12700679 (+)
G37783 LOC103386132,LOC107099520,LOC105931731,LOC106513340 non-coding upstream 387422 12681128 ~ 12682749 (+)
G37778 NA non-coding upstream 408186 12661771 ~ 12661985 (+)
G37980 NA non-coding downstream 104 13071974 ~ 13072825 (+)
LOC120556864 NA non-coding downstream 3549 13075419 ~ 13079887 (+)
G38001 NA non-coding downstream 43784 13115654 ~ 13116572 (+)
LOC120556887 NA non-coding downstream 703911 13775781 ~ 13777150 (+)
G38156 NA non-coding downstream 839459 13911329 ~ 13989841 (+)
kif21b kif21b other upstream 162236 12825516 ~ 12907935 (+)
tmem167b tmem167b other upstream 317886 12749208 ~ 12752285 (+)
b3galt6 b3galt6 other upstream 329123 12734526 ~ 12741048 (+)
cdab cda,LOC103354969,LOC106590862 other upstream 350678 12716160 ~ 12719493 (+)
G37730 NA other upstream 682996 12386171 ~ 12387175 (+)
spcs1 spcs1 other downstream 133599 13205469 ~ 13208258 (+)
vamp3 vamp3 other downstream 224506 13296376 ~ 13303615 (+)
per3 per3 other downstream 233545 13305415 ~ 13329332 (+)
mdm4 mdm4 other downstream 247814 13319684 ~ 13372372 (+)
tfeb tfeb other downstream 385059 13456929 ~ 13528319 (+)

Expression


Co-expression Network