per3 (per3)


Basic Information

Item Value
gene id per3
gene name per3
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 13305415 ~ 13329332 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU51054
GCCTCACGTTGCACAAATGTGTCAAGTGCTTTGGAATAGAAGACGATTTAGCTAACGTAAGTGActggaaattaaaataatactttTAATGCGGCCCGGTGATCAATTTGATAGAATTTTATTTTTCGGATATTGAAGGGGAGACATACGTGGAGTGGATAAGTGTTAAAGGCAGATCCTCACATCTTACACTCAGCACtcattgaaataataataatttattgtcaCCACATGGAACCCATTCCCTTTATTGAACATATGAAGACCCCTACTGACCACTGTAATTGGCCAAATTGATGTGTGACCAAAGCACAGAGATGCCTGGAGGTGACAGCGGTCCAGATGGGGAGGAGCCTGCGTTACCGTCagcaacaggaggaggtgg
>XM_039796569.1
GAGTTATATTGTTCCTGCCTCACGTTGCACAAATGTGTCAAGTGCTTTGGAATAGAAGACGATTTAGCTAACGTAAGTGActggaaattaaaataatactttTAATGCGGCCCGGTGATCAATTTGATAGAATTTTATTTTTCGGATATTGAAGGGGAGACATACGTGGAGTGGATAAGTGTTAAAGGCAGATCCTCACATCTTACACTCAGCACtcattgaaataataataatttattgtcaCCACATGGAACCCATTCCCTTTATTGAACATATGAAGACCCCTACTGACCACTGTAATTGGCCAAATTGATGTGTGACCAAAGCACAGAGATGCCTGGAGGTGACAGCGGTCCAGATGGGGAGGAGCCTGCGTTACCGTCagcaacaggaggaggtggagaggaggggaggatgTCGTCAGGGCAGCAGGACGGAGGGGGGCAGTCAGAACGCCacaaggggggggagtggaGTTTCAGGTGGAGAAGTAGGGCAGGAAGATGAAGAGATGACTAGCGGATCGCATGACCTCTCTTCCTCGGCCAATCACAGCCCTGGTAGCGTCACAGGATCCACCTCAGCTTCAACCAAGAGcagtgAAAATACAGATGGTAGCAGAGGGCAGGCCCACAGAGAGGTGATGGTCACTGTGGCTGAGATGAAGAAGAGGATTCCATCAGACAAACGCAGTCGCAGCAAAGCCAGCACTGTGGAGGCCTTACATTACGCACTCAACTGTGTCAAACAAGTGCAAGCCAATAGTGAATACTACAAACTGCTGATGCGAAATGGCCAGGATGAGAGGAGAGATGCCACTGTTTGCACTCTGGAAGAGTTGGAGAGGGTCACATCTGAGCACACCCTTAAAAACACGGACTCCTTCGTGGTGGTTTTCTCCCTGTCGAGTGGCTGCGTGCTGTATGCGTCGGAGCAGGCTCCCAGCATCCTGTGCTGCAAGAGGAAGTTCCTGGAGTCGGCCAAGTTTGTGGAGCTGCTCTTCCACCAAGATGTTAATGTCTTCTACTCGCACACGGCTCAGCCACATCTGCCACCCTGGAGCAACTCACATACAGCGGGGGTTCTGTTTGACTGTGCCCAGGTCAAGTCTTTCTTCTGCAGAATCAGGGGTGGGAAGGACCATGAGGGTGAGATGCGTTACAACCCGTTTCGGGTAACACCCTACCTGCTGACGGTGCAGGGAACAGGAAGCAGTGGGGAAGGCGAGGAGCCGTGTTGCCTGGCGCTGGCTGAACGCATCATCTCTGGATATGAGGCGCCTCGAATCCCCATGGACAAGCGCATCTTCACCACCACACACTCAGCCGGCTGTGTGTTCCTGGAAGTGGATGACCGGGCTGTGCCGTTGCTAGGATACCTTCCCCAGGATCTGATTGGCACTTCGTTGCTGACTTGCATTCACCCAGACGACCGCCCCCTCATGCTGTCTGTGCACCGGAAAGTGTTGAAATATGCAGGCCAGTCTCCGTTCGAGCACTCTCCGGTGCGTCTGCGCTGTCAGAATGGAGACCACATTACATTGGACACCAGCTGGTCCAGCTTCATCAACCCTTGGAGCCGCAAAGTGGCCTTCATCATTGGACGGCATAAAGTCAGGACGAGTCCACTGAATGAGGATGTGTTTGCTGCTCCGACTACAAAGGATGTCCCAGTCACCCATGAGGAAATAAAAGAACTGCAAGCACAGATCTATAAGCTTTTCCTGCAGCCGGTCCATAACAATGGTTCCAGTGGTTACGGCAGTTTGGGGAGTAACGGCTCCCATGAGCACTACATCAGCATGGCTTCTTCAAGTGACAGCAATGGTAACCTGTGGGAGGACTCACACCGGGAACCGATGACTTTGCAGCAGATCTGTGCTGATGTTAATCGAGTCAAGAGTTGGGGCCAGCAGCCTTATCTAGGTTCCAACCACAAAAATGCTCTTCACAAACCAGCCACAGCACGTCTGCCCCCTGCAGTCTCCAACCCTGAGGTCAGAGATCACGAAGAAGGCAGGAAGCAAACGCACATTCCCTCCTATCAGCAGATCAACTGTGTGGACAACATCATCAGATATTTGGAGAGCTGTACAGGTCCAGCCCTTAAGAGGAAGAGTGACTCTTATTCCCTGgccacctcctcttcctcatcttctACCTCTGAAGACAACAAGCCTGCTGGAGCCACTGACACAGCTCAGGCCAGCTCAGATGTGGTGTTGGACAGTGCGGCGTCTGTGGCCCCAACGACAGCAGCAGTTGTTGGAGCGCCCCTGACAGACATCACAATGTCCACAAAGGCCATGAGTGTAGTCTCTGTCACCAGCCAGTGTTCGTACAGCAGCACCATTGTCCATGTGCCACAGCCTGAATCAGAGGCCACAGCTTTGGAGGACGCCCCGATGGGCAGTGAGCCTACTGATGCTGCTTCGACCCCTCTCTGTCCCGCACCGAGCCCGGCCACAGAGGAACGAAGGTTCATAGGTCTCACCAAGGAGGTGCTGTCAGCTCACACCCAGAAGGAGGAGCAAGAGTTTGTGGATCGATTCCGCCATCGCATCCTCCAGAGCCCCTACAGCTCCTATCTGCAGCTGGACAACAGCTCTATGGCTCACTCCCATCACCCAGGCAACCACCTACATCCAGTGAGCGCTGGTGGGTTAAACCGCTCTAGGAGAGGAAAGCACAGACACAAGCGCCCTAAACCCCAGGGTTCCTCAGACAGCTACGCTTCCCCAGTTGGCCCTCCTTGCCGTGTCCCAGACTCCTCCTGGCCCTCCTCAGAGTCCTCCCAGCCCCAGATGGTTGCAAGCCTTCAGCCAGGTGGTTACAGGGCGCCCTACAGCCAAACATCCCCACTACAGGCGCCATTCTTCCCCATGATGGCAACCCAGCCTGGCCCGGAGCAACCGCCTAGACCACAACAGCTGCCTGCAGCAACccccatggtgctgcagccttcTGACCAACCCCAGCTCAGCTACAACTTCAACATCATGCAGTCACCTCAGAGTCTGCCAGGCATGCAACCAATTCAGATGGAGCCCTTTCAGAATCTGCAGAATATCCAGAACTTTCACAATCTTCAGCCAATGGCTCCAGCTCAGGGCATCCATCCTTACATGACTCCGGTCATGGCTGTCATCCTGCCCAGCTACCCAACTCCAGGTTACCCGTCCATTTACCCACAATCCATTTACCCTCTGTCCACTCCTTCCATGCTGCCCCAGGCACCCATCGCCATGTCAGGCTTTGCTTCTGGCAGTGTCCCCTTCCCCCAGCCCCAGTCCCAAGTCCAGCCTGTCCCCCAAACTCAGACCAGCCTGGGCCCTCTGCTTTGCTCACCCAGAGCCAGCTCCTCTGtcggggaagaggaggaggcagcTGGGCCTCAGGCTCTTTTTTCCAGCTCTCGCTCAAGTTCTCCGCTGCAGCTGAACTTGCTGCAGGAGGAGCTGCCAAAGCCGAGCGAAGGGCAGAGCAGCATCGGGCACAACCACGCCAATAGCCTCCATGACCAACATGCCAACCAGggtgaTAACCCCAGAGAGTCTGGGAACCATGATGCCCAGTCTACATCCAGTGAACTGATtgacctgctgctgcaggaggaTGCCAGGTCAGGGACTGGCTCCAATGCCTCAGGGTCTGGATCAGGGGAGTCTGGAGGCTCTCTGGGATCTGGATCTGGCTCCAACGGAACCTCCACCTCACACACTGgcagcagcaacagcagcaaatACTTTGCAAGTAATGATTCATCGGACACATCACGCAAAGCCCGTAAGAGCCAGGAGGCGCCGGCAGAGCACCAGCACTGCTTCGACACTCCGGTGGAGAACCCACTGTGGAGCAGGATCCAGCACACGCCTGAGCGTGTCTTGATGACGTACCAGATCCACACTAGGGACCAGAATGAGGTGTTGGCAGAGGACAGGGAGAAGCTCCGGGTGCTGCAGTCCCTCCAACCCTGGTTCAGCcaggagcagagagaggagcTGTTTGAGGTCCATCCCTGGATCCAACAGCACACTATTCCACGGGGGATAGACACACAGGGTTGTGTGAGTTGCAACTCGGGACAAGAGGTCGCCCGCTCCCCTCACCCTGCGGCCCCCGATAGCTCGTCCCCTCTGGAGATCCCCCAGCAGGACTCCATTGGACCTGTGGAGGACACTTGAGAGACATGGACTGGACTCCAAAACAACCAACCACCCAACTCACATTGAACCAGCCCTGCCAGAAACCTTAACAACTCCCACCATGCATCTCTTCTGACCAATCCGGAGGAGTAGGTCCCTATGCTTTAGTTTGACGTTTAACATGTTTTGTTAAGGTATCGGAGGCGGGACAAGGCTCTGAGGAACAGAGGAGGCAAAAGAGACAGGCATTTTCTCATTTCAGCCAGCCTAATGTGACTGCCTTCATCTGACCATACGTATTATACCTCTCTTCTTCTTGTGTTCATAGACCCCTGTAGGGGTTTAGTTTGTATTTAAGGCAGACCAGTAATTGGGACCAtgaaccatttgacattcaataTAAGAAGATGACCCCCTGAACATGCCTCTGAACATGAGCACTGTGTGCACTGCACGCTCCCAGTCTGTTGTATTAGTGTGACTGGGTGACAAAGACAAAGACGGTGCTGGCCCAGTTTGAGTAACGGAACACACACCAGACTCTTCTCTCCAGGTTGTACAGTATGTCGGCCACATCAACTCCTTGAGCTGCATAGTAACTTAACCATGGTTTGACACATGGTACATTTTTTGGGATTGACATGAAGATGACGCATTAGCTACTCtctgtttataatgttcatAGTCCTGTCTACTCTGGTCTAAGATGATTGTTATTAGAGTATATTCTCTTATTCCACTGGTGGGTTTCCTCTTGTCTAAAAAcatcatttttaatgttaatcTGACACGTGAACAACAGCAAACATGATGATCATTTCAAATTGAATTTAGTGCTACAAAACAAGTCCACCTCAATGTCCAAAACGTCATGTTGAGAGTCCTTTCTCCACTCAGTATCCTGGTTATCaccctacagtacctgtagctTACCTTTTGAATTATACAGACACAACGTGGCCCTGAATGTCCTCTGATCCTGGGTTTATgaatgaattgtgtgtgtgtctgcgtgtgtgtgagagctgaCCGATTTGAGATACAGTTGTCCAACCGTGCAAGACAGACCAGGGTTTTCTATCATTTTTAGATTAAAGGTACATTACAGTACCATGTTTCTTATAAAACAAGGACACAAAAAAACTTCACAAAGTTTAGAAAACCATTTGTCTTGAATTCAgggaatgtttgtgtgtgacacaaaggaataaataaatgaactatGTATGTAA

Function

symbol description
per3 Predicted to enable transcription cis-regulatory region binding activity and transcription corepressor binding activity. Acts upstream of or within circadian regulation of gene expression and photoperiodism. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; hematopoietic system; oocyte; red sensitive photoreceptor cell; and visual system. Human ortholog(s) of this gene implicated in advanced sleep phase syndrome and advanced sleep phase syndrome 3. Orthologous to human PER3 (period circadian regulator 3).

NR:

description
PREDICTED: period circadian protein homolog 3 isoform X1

GO: NA

KEGG:

id description
K21945 PER3; period circadian protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
TU51054 False 385 lncRNA 0.43 2 13305431 13312141
XM_039796569.1 True 5376 mRNA 0.52 23 13305415 13329332

Neighbor

gene id symbol gene type direction distance location
trnar-acg_15 NA coding upstream 19104 13286239 ~ 13286311 (+)
camk1b NA coding upstream 41075 13219343 ~ 13264340 (+)
gnl3 NA coding upstream 110514 13171393 ~ 13194901 (+)
psma5 psma5 coding downstream 12568 13341900 ~ 13347042 (+)
LOC120557160 sort1 coding downstream 23736 13353068 ~ 13364340 (+)
myog myog coding downstream 50788 13380120 ~ 13382642 (+)
tmem183a tmem183a,LOC102794008 coding downstream 116959 13446291 ~ 13456049 (+)
srgap2 srgap2 coding downstream 528429 13857761 ~ 13919015 (+)
G38001 NA non-coding upstream 188843 13115654 ~ 13116572 (+)
LOC120556864 NA non-coding upstream 225528 13075419 ~ 13079887 (+)
G37980 NA non-coding upstream 232590 13071974 ~ 13072825 (+)
G37978 NA non-coding upstream 233545 13070171 ~ 13071870 (+)
G37970 NA non-coding upstream 241049 13063334 ~ 13064366 (+)
LOC120556887 NA non-coding downstream 446449 13775781 ~ 13777150 (+)
G38156 NA non-coding downstream 581997 13911329 ~ 13989841 (+)
G38163 NA non-coding downstream 662577 13991909 ~ 13992179 (+)
G38164 NA non-coding downstream 673630 14002962 ~ 14003187 (+)
G38206 NA non-coding downstream 716025 14045357 ~ 14045559 (+)
vamp3 vamp3 other upstream 1800 13296376 ~ 13303615 (+)
spcs1 spcs1 other upstream 97157 13205469 ~ 13208258 (+)
kif21b kif21b other upstream 397480 12825516 ~ 12907935 (+)
tmem167b tmem167b other upstream 553130 12749208 ~ 12752285 (+)
b3galt6 b3galt6 other upstream 564367 12734526 ~ 12741048 (+)
tfeb tfeb other downstream 127597 13456929 ~ 13528319 (+)
LOC120557956 nrn1,LOC104931831,LOC102785075,LOC100692329,LOC102195708,LOC102307414 other downstream 897765 14227097 ~ 14233537 (+)
LOC120557952 mettl21b other downstream 1005828 14335160 ~ 14337760 (+)
cdk4 LOC107684003,LOC107701179 other downstream 1411277 14740609 ~ 14757359 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other downstream 1435965 14765297 ~ 14857069 (+)

Expression


Co-expression Network