Item | Value |
---|---|
gene id | znf740a |
gene name | LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 |
gene type | misc |
species | eurasian perch (Perca fluviatilis) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_053115.1 |
NCBI id | CM020912.1 |
chromosome length | 44863486 |
location | 14765297 ~ 14857069 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
description |
---|
PREDICTED: gastrula zinc finger protein XlCGF58.1-like isoform X4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU51712 | False | 1563 | lncRNA | 0.34 | 2 | 14806648 | 14857069 |
TU51717 | False | 1233 | lncRNA | 0.39 | 2 | 14765297 | 14856007 |
XM_039796949.1 | True | 5790 | mRNA | 0.44 | 21 | 14833362 | 14856782 |
XM_039796950.1 | False | 5767 | mRNA | 0.44 | 21 | 14833364 | 14856782 |
XM_039796951.1 | False | 5758 | mRNA | 0.44 | 21 | 14833364 | 14856782 |
XM_039796952.1 | False | 5735 | mRNA | 0.44 | 21 | 14833366 | 14856782 |
XM_039796953.1 | False | 5705 | mRNA | 0.44 | 20 | 14833363 | 14856782 |
XM_039796954.1 | False | 5705 | mRNA | 0.44 | 20 | 14833363 | 14856782 |
XM_039796955.1 | False | 5705 | mRNA | 0.44 | 20 | 14833363 | 14856782 |
XM_039796956.1 | False | 5706 | mRNA | 0.44 | 20 | 14833362 | 14856782 |
XM_039796957.1 | False | 5706 | mRNA | 0.44 | 20 | 14833362 | 14856782 |
XM_039796958.1 | False | 5706 | mRNA | 0.44 | 20 | 14833362 | 14856782 |
XM_039796959.1 | False | 5706 | mRNA | 0.44 | 20 | 14833362 | 14856782 |
XM_039796961.1 | False | 5707 | mRNA | 0.44 | 20 | 14833361 | 14856782 |
XM_039796962.1 | False | 5674 | mRNA | 0.44 | 20 | 14833364 | 14856782 |
XM_039796963.1 | False | 5618 | mRNA | 0.43 | 19 | 14833366 | 14856782 |
XM_039796964.1 | False | 5620 | mRNA | 0.43 | 19 | 14833364 | 14856782 |
XM_039796965.1 | False | 5621 | mRNA | 0.44 | 19 | 14833363 | 14856782 |
XM_039796966.1 | False | 5623 | mRNA | 0.43 | 19 | 14833361 | 14856782 |
XM_039796967.1 | False | 5623 | mRNA | 0.43 | 19 | 14833361 | 14856782 |
XM_039796968.1 | False | 5533 | mRNA | 0.43 | 18 | 14833367 | 14856782 |
XM_039796969.1 | False | 5537 | mRNA | 0.43 | 18 | 14833363 | 14856782 |
XM_039796970.1 | False | 5539 | mRNA | 0.43 | 18 | 14833361 | 14856782 |
XM_039796972.1 | False | 5539 | mRNA | 0.43 | 18 | 14833361 | 14856782 |
XM_039796973.1 | False | 5449 | mRNA | 0.43 | 17 | 14833367 | 14856782 |
XM_039796974.1 | False | 5682 | mRNA | 0.44 | 20 | 14833365 | 14856782 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC120558200 | LOC104954920,LOC103376555,LOC104932002,LOC101062422 | coding | upstream | 96843 | 14652797 ~ 14668454 (+) |
timeless | timeless | coding | upstream | 114863 | 14638398 ~ 14650434 (+) |
prph | prph,LOC103375502 | coding | upstream | 127857 | 14631878 ~ 14637440 (+) |
pmela | pmel,LOC103359383,LOC103375503 | coding | upstream | 138971 | 14619517 ~ 14626326 (+) |
olfml3b | olfml3 | coding | upstream | 162387 | 14599023 ~ 14602910 (+) |
smug1 | smug1,LOC102792633 | coding | downstream | 392 | 14857461 ~ 14861776 (+) |
LOC120556996 | LOC104963001,LOC100707699,LOC101468050,LOC103376574,LOC102797035,LOC102310016,LOC102194854 | coding | downstream | 95253 | 14952322 ~ 14962342 (+) |
faim2b | LOC103376611,LOC101076527,LOC100707431,LOC101467547,LOC102195132 | coding | downstream | 108638 | 14965707 ~ 14969461 (+) |
LOC120556827 | LOC103376578 | coding | downstream | 162404 | 15019473 ~ 15118158 (+) |
LOC120556705 | NA | coding | downstream | 300639 | 15157708 ~ 15159398 (+) |
G38495 | NA | non-coding | upstream | 50780 | 14712784 ~ 14714517 (+) |
G38496 | NA | non-coding | upstream | 53163 | 14710726 ~ 14712134 (+) |
G38449 | NA | non-coding | upstream | 74672 | 14642932 ~ 14690625 (+) |
G38441 | cdk2 | non-coding | upstream | 154875 | 14607839 ~ 14610422 (+) |
G38331 | NA | non-coding | upstream | 270557 | 14492903 ~ 14494740 (+) |
G38526 | NA | non-coding | downstream | 6253 | 14863322 ~ 14864107 (+) |
G38538 | NA | non-coding | downstream | 58609 | 14915678 ~ 14976904 (+) |
G38670 | NA | non-coding | downstream | 393500 | 15250569 ~ 15250933 (+) |
G38738 | scn8a,LOC106518053,LOC106572732,LOC103465359,LOC108440919 | non-coding | downstream | 539660 | 15396729 ~ 15397507 (+) |
G38762 | NA | non-coding | downstream | 605232 | 15462301 ~ 15463452 (+) |
cdk4 | LOC107684003,LOC107701179 | other | upstream | 7938 | 14740609 ~ 14757359 (+) |
LOC120557952 | mettl21b | other | upstream | 427537 | 14335160 ~ 14337760 (+) |
LOC120557956 | nrn1,LOC104931831,LOC102785075,LOC100692329,LOC102195708,LOC102307414 | other | upstream | 531760 | 14227097 ~ 14233537 (+) |
tfeb | tfeb | other | upstream | 1236978 | 13456929 ~ 13528319 (+) |
mdm4 | mdm4 | other | upstream | 1392925 | 13319684 ~ 13372372 (+) |
calcoco1b | LOC104959845,LOC103376572 | other | downstream | 7990 | 14865059 ~ 14874459 (+) |
G38834 | NA | other | downstream | 788442 | 15645511 ~ 15647851 (+) |
crbn | crbn,LOC102793823 | other | downstream | 1066252 | 15923321 ~ 15937097 (+) |
ccdc174 | ccdc174 | other | downstream | 1108333 | 15965402 ~ 15974237 (+) |
eefsec | eefsec,LOC102787825 | other | downstream | 1192609 | 16049678 ~ 16060330 (+) |