XLOC_005086


Basic Information

Item Value
gene id XLOC_005086
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 3519168 ~ 3544016 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011069
CCAAAAGTGATGTTTGGTGTCAGCCGACCTCGCGCCGCCTCCCGCATGATAACGAGCGGTTCTCTCGCGTCCCTCCCATGGATATATGAATAAAACATGACATTACAGTCGGTGCAGGCAGAGGTTGAGCTGAGCTTCTGTCTGCGCGTCGCGTCACTGCAGCAGAGCGTCGCGTTCATGTGATTCTGCGCGCGCGCTCACAGATAAACACCGGCGATATTGATCTGTGGAGAAACGGAGAAACCGAGAAAAACCGGCCGATGCTCAGCGCGGGAGTCTGCGGGAGGAGGACTGTGCTCAGTGTTTAGTGGATGCTGGAGGCTGTCATGACAGAAATCACGAGGAGGAAACATTTCACGCGAGCGGAGGAAGGAGGGACGGAAAGTAAAAGATAAGCGAGGAGTGTGAAAGAAGTGAATAAAGGAAGTGACAGTGCAGGACGTGCGATATTGCATCAGtcgga

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011069 True 463 lncRNA 0.54 2 3519168 3544016

Neighbor

gene id symbol gene type direction distance location
XLOC_005085 TANC2 coding downstream 65579 3314504 ~ 3453589 (-)
XLOC_005084 lsm12b coding downstream 220019 3287783 ~ 3299149 (-)
XLOC_005083 NA coding downstream 234259 3281756 ~ 3284909 (-)
XLOC_005082 gngt2b coding downstream 266905 3249054 ~ 3252263 (-)
XLOC_005081 si:ch1073-13h15.3 coding downstream 281607 3220285 ~ 3237561 (-)
XLOC_005087 NA coding upstream 25731 3569747 ~ 3570081 (-)
XLOC_005088 CABZ01069040.1 coding upstream 107999 3652015 ~ 3705862 (-)
XLOC_005089 vps25 coding upstream 170060 3714076 ~ 3721957 (-)
XLOC_005090 tlcd3bb coding upstream 196589 3740605 ~ 3756405 (-)
XLOC_005091 MAZ coding upstream 222541 3766557 ~ 3778848 (-)
XLOC_005073 NA non-coding downstream 774527 2703355 ~ 2744641 (-)
XLOC_005072 NA non-coding downstream 849668 2625669 ~ 2669500 (-)
XLOC_005071 CU929359.1 non-coding downstream 901658 2579237 ~ 2617510 (-)
XLOC_005069 NA non-coding downstream 1039237 2067963 ~ 2479931 (-)
XLOC_005092 NA non-coding upstream 238605 3782621 ~ 3786382 (-)
XLOC_005094 NA non-coding upstream 316448 3860464 ~ 3865234 (-)
XLOC_005102 NA non-coding upstream 545721 4089737 ~ 4129820 (-)
XLOC_005103 NA non-coding upstream 599578 4143594 ~ 4169699 (-)

Expression


Co-expression Network