G38832


Basic Information

Item Value
gene id G38832
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 15644061 ~ 15644399 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU52133
cgaagaaaaaaaaacagttcacaAAACAATCCggactcaaggtccacttactttGACTAAAATCAAGGTCTTATGGGTGCTAGGAGTCTTGCAAAGTTTGAACATCGATAACTATGGCAACTGAACAATTTCCAAGTGCTGATGAGAACCATGcaaattttattcttttttttattctatataATAAATCACTCAATTTTTGTTGTATAAAGTCTGATCTGTTTAATTTTCTCATATAGATGCAATTTCCCTTTGATATAGATCACATTGCATCGCATGTCACTTATGTTCATATAGTTCATCATTATTATAATGACAATGTAATCTATAGTTTTTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52133 True 339 lncRNA 0.31 1 15644061 15644399

Neighbor

gene id symbol gene type direction distance location
smarcc2 smarcc2,LOC102786132 coding upstream 506 15631352 ~ 15643555 (+)
LOC120556683 LOC102785850,LOC100702077,LOC102299981,LOC103376602,LOC102207065,LOC102237428 coding upstream 18016 15606682 ~ 15626045 (+)
LOC120556642 mettl7a,LOC102782606,LOC101484749,LOC103385978,LOC103147640 coding upstream 187097 15455607 ~ 15456964 (+)
LOC120556644 NA coding upstream 188571 15453193 ~ 15455490 (+)
si:dkey-195m11.8 LOC103376590 coding upstream 268449 15359663 ~ 15375612 (+)
endou endou,LOC102787429 coding downstream 13132 15657531 ~ 15661996 (+)
LOC120557865 LOC103376609,LOC103465378 coding downstream 32468 15676867 ~ 15709140 (+)
LOC120556700 NA coding downstream 65817 15710216 ~ 15710890 (+)
LOC120556777 gpr84,LOC108235641 coding downstream 68850 15713249 ~ 15715495 (+)
tac3b NA coding downstream 92146 15736545 ~ 15741669 (+)
G38829 NA non-coding upstream 17221 15626311 ~ 15626840 (+)
G38788 espl1 non-coding upstream 100689 15542253 ~ 15543372 (+)
G38762 NA non-coding upstream 180609 15462301 ~ 15463452 (+)
G38738 scn8a,LOC106518053,LOC106572732,LOC103465359,LOC108440919 non-coding upstream 246554 15396729 ~ 15397507 (+)
G38670 NA non-coding upstream 393128 15250569 ~ 15250933 (+)
G38852 NA non-coding downstream 29580 15673979 ~ 15755059 (+)
G38858 NA non-coding downstream 74597 15718996 ~ 15722184 (+)
G38860 NA non-coding downstream 83580 15727979 ~ 15729400 (+)
G38885 LOC104942130 non-coding downstream 116393 15760792 ~ 15762315 (+)
G38948 NA non-coding downstream 270140 15914539 ~ 15914901 (+)
calcoco1b LOC104959845,LOC103376572 other upstream 769602 14865059 ~ 14874459 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other upstream 786992 14765297 ~ 14857069 (+)
G38517 NA other upstream 827625 14808352 ~ 14816436 (+)
cdk4 LOC107684003,LOC107701179 other upstream 886702 14740609 ~ 14757359 (+)
LOC120557952 mettl21b other upstream 1306301 14335160 ~ 14337760 (+)
G38834 NA other downstream 1112 15645511 ~ 15647851 (+)
crbn crbn,LOC102793823 other downstream 278922 15923321 ~ 15937097 (+)
ccdc174 ccdc174 other downstream 321003 15965402 ~ 15974237 (+)
eefsec eefsec,LOC102787825 other downstream 405279 16049678 ~ 16060330 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other downstream 504726 16149125 ~ 16158362 (+)

Expression


Co-expression Network