G38834


Basic Information

Item Value
gene id G38834
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 15645511 ~ 15647851 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU52135
tgtcACTTTTAGTAGGAGGCCATGGTTGAATTACTCTAGCTCACTTACACAGCTGTTGTTGAACTAGACCaaacatcttttggttataagAAAGTTACTATAACTGCTACGCTGCACTCCCAATGCAGGTTACGACACATGAAAACGGTCTCTCTTCTTCACTCACTACCTAGATGAATGCAAAGCCACTGTGCAGCAGTGAGCTGTTTCTCCATCGGAGTCAGGAGATCAGCGCTGCAGAGAGCTTTCAGGGGTTTGCTCATACCCTCGGCTCAGCCGGACATGATGTAGTGGCCAAAGGCTGTGAGGCGCGAACACAGAGTCAGCAAGCATgtggtctatatccacgacgttccacttctgggattgctcttgTTCTGCCGGAGagtccgccggatgtcactctttttggaGGTCCGTTTTTGGATGTCCATccccttctgctttctttgtgttgtaattttaaactcgggtcgatttatgaggactatcatggttaactgctcctcagatctctgcagggtaaatccagacggctagctagactatctgtccaatctgagttttctcttgcacaactaaaacaacctttgaacatacacgttccaccaaaacaagttccttcccgaggctattttgcagaggcatcgTGGCTCCACTCGGcatttagcaccgcccaagacgattgcgattggttacatgaaatgccaataaaccagagcacgtttttctcccctccctgaatgctgtgtggattagccagaccctcctccgcagcgctgtggaggaagatcgggcaaagcgagactagcgaGCATGTGACACTAAGACACAATGACACTCGTTGTTTTATACATCCACAGCAGTAGTGTTGCATATTTTCGTGAGGCACATTGCACTGTATAGGACCTGAAAGAGTCATCTGAGTGCATCTGTGCAGTTTTACCTTCATAGTTAATGCAGCCATTGGCATCTTCATGTCCCGCTAAAAGagtctccacctcctcctctgtcattttttTTACCTAGTGTAGTGAGAACATGACGCAGCTCTGCTCCCATCACTGTGCCGTTTCCCTCCTTGTCAAAGACACGCAGACCCTCTACGATATCCTCAAAGGAGCCCTGGTCCTTGTTCTTAGCAATGGCCTGAAGCATGGGCAGGAACTGTTCAAAATCCAGCATCTTGTAGTTCATCTCTGCAggtcaaacaacaaaaaatgttttatttgaaaCTTTTATGACATTGGCAGATTTGTATGGATGTCAGTAAGCTTGCACATAATTCAGAGAGCCTCTCTTTATTCCCAGCACAGGCAAACAATggaactgcattttttttttttttacaatatcagAGCTTTAGgcttaatgtttatttattaaaaaacctcatattTTCATTGATTTGAAATATACAAATAGTACCACATTTGCACATAGCACACACCTCTATACATAGTAATTAATGTCAACATTAGAGCACCATCTCAGAGGACCTTACAAACTTCATTAAGAACAGAGGAGGACTTACTTGTGGAGTGAACTTGGAGCAAGGCTTTTATGGGTCATCAATATTAAAAGAAATGCTCTGTATgctcatactgtatatgtatccCAAACAAGCCAAAAACAGCAGTTCAGCACATACCGATTCTCTGAGGCTGCAATGAGGGATTATACACACAACACCCAACCTAACTGTTAGCCAAGGCAACGATAATGTAGTAGGTGGAATTGGTCTATTTTTAGTTGTGGCTGGTGAATCAGAGACTTGCCTTCTAACTTGGGGTTTCCCAGGACCTTGAGCACCTCAGCATTGACAGGGTTCTGTCCAAGGGCCCGCATAACATCACCACACTGGCTGTAGGTGATCTTCCCCTCACCCGTCCGGTCAAACAAAAGGAAGGCCTCCTTGAACTCTAATATGGAGACAGAGAGGTAGAACTTAGATCTAGCTGTAAAGtaaattaataaacataacTAACAAATGTTAAGAGACACAAGCAAACACATATGCACAACACCAAAGGGAAAATGTGTAATTTTATTGAATAAAGTTTTTTGTGTAGAAGAACAGCTGATACCATTGCACAAGCGGTTTTGACACTCGACACATGCAATTAAGTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52135 True 2133 TUCP 0.44 2 15645511 15647851

Neighbor

gene id symbol gene type direction distance location
smarcc2 smarcc2,LOC102786132 coding upstream 1956 15631352 ~ 15643555 (+)
LOC120556683 LOC102785850,LOC100702077,LOC102299981,LOC103376602,LOC102207065,LOC102237428 coding upstream 19466 15606682 ~ 15626045 (+)
LOC120556642 mettl7a,LOC102782606,LOC101484749,LOC103385978,LOC103147640 coding upstream 188547 15455607 ~ 15456964 (+)
LOC120556644 NA coding upstream 190021 15453193 ~ 15455490 (+)
si:dkey-195m11.8 LOC103376590 coding upstream 269899 15359663 ~ 15375612 (+)
endou endou,LOC102787429 coding downstream 9680 15657531 ~ 15661996 (+)
LOC120557865 LOC103376609,LOC103465378 coding downstream 29016 15676867 ~ 15709140 (+)
LOC120556700 NA coding downstream 62365 15710216 ~ 15710890 (+)
LOC120556777 gpr84,LOC108235641 coding downstream 65398 15713249 ~ 15715495 (+)
tac3b NA coding downstream 88694 15736545 ~ 15741669 (+)
G38832 NA non-coding upstream 1112 15644061 ~ 15644399 (+)
G38829 NA non-coding upstream 18671 15626311 ~ 15626840 (+)
G38788 espl1 non-coding upstream 102139 15542253 ~ 15543372 (+)
G38762 NA non-coding upstream 182059 15462301 ~ 15463452 (+)
G38738 scn8a,LOC106518053,LOC106572732,LOC103465359,LOC108440919 non-coding upstream 248004 15396729 ~ 15397507 (+)
G38852 NA non-coding downstream 26128 15673979 ~ 15755059 (+)
G38858 NA non-coding downstream 71145 15718996 ~ 15722184 (+)
G38860 NA non-coding downstream 80128 15727979 ~ 15729400 (+)
G38885 LOC104942130 non-coding downstream 112941 15760792 ~ 15762315 (+)
G38948 NA non-coding downstream 266688 15914539 ~ 15914901 (+)
calcoco1b LOC104959845,LOC103376572 other upstream 771052 14865059 ~ 14874459 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other upstream 788442 14765297 ~ 14857069 (+)
G38517 NA other upstream 829075 14808352 ~ 14816436 (+)
cdk4 LOC107684003,LOC107701179 other upstream 888152 14740609 ~ 14757359 (+)
LOC120557952 mettl21b other upstream 1307751 14335160 ~ 14337760 (+)
crbn crbn,LOC102793823 other downstream 275470 15923321 ~ 15937097 (+)
ccdc174 ccdc174 other downstream 317551 15965402 ~ 15974237 (+)
eefsec eefsec,LOC102787825 other downstream 401827 16049678 ~ 16060330 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other downstream 501274 16149125 ~ 16158362 (+)
G39104 LOC103385912,LOC104930488,LOC103358732,LOC101079922 other downstream 785387 16433238 ~ 16435229 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G20230 NA misc CI01000001 null 11022127 ~ 11028777 (-)