G38966


Basic Information

Item Value
gene id G38966
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 15984624 ~ 15985096 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU52310
agctcagcaagcaagcaacatgtcggtaaaggagatttgccgtttgtgtaacgagaatttaggaataaaaggcaccctttcaggttcccggttcatattccaaaagaaggatccaagagaaaaaagcattagcgagcagctaacagaattagggctaccgctgtctgaaaatactggtcagctgattggataaaccatctgtctatcaccacctaaacccgcctcaaaaccaacgctgattggtcggtcgtttggcgaacggctccaaattttctctatctcaagatgccagactgatctgcgagtggaaaactggagctcgccagatcaggacggtctcacgaggctatgtctaagctactggatgcctaaaatttccttcgggatgaataaagtcgatctatcgatctatcgatctatctatcgatctatctacCTACAATGTTGCGTTATAACAGGGTTTTAAATAAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52310 True 473 lncRNA 0.44 1 15984624 15985096

Neighbor

gene id symbol gene type direction distance location
tatdn2 NA coding upstream 24344 15948449 ~ 15960280 (+)
vhl vhl,LOC104941408 coding upstream 39072 15942764 ~ 15945552 (+)
pa2g4a pa2g4,LOC104933448,LOC102793326 coding upstream 71005 15903500 ~ 15913619 (+)
erbb3a erbb3 coding upstream 84723 15879790 ~ 15899901 (+)
arf3b arf3,ARF3,arf3a,LOC102781726,LOC106921537,LOC106954774,LOC104956878 coding upstream 107764 15871718 ~ 15876860 (+)
LOC120558102 LOC104943766 coding downstream 6638 15991734 ~ 16011506 (+)
prkcda prkcd,LOC104933455 coding downstream 31883 16016979 ~ 16034962 (+)
rft1 rft1 coding downstream 50878 16035974 ~ 16039274 (+)
mustn1a mustn1 coding downstream 54717 16039813 ~ 16041213 (+)
arpc4 arpc4,LOC103358720,LOC100696600,LOC103385929,LOC107721188 coding downstream 176864 16161960 ~ 16167138 (+)
LOC120557201 NA non-coding upstream 63002 15919385 ~ 15921622 (+)
G38948 NA non-coding upstream 69723 15914539 ~ 15914901 (+)
G38885 LOC104942130 non-coding upstream 222309 15760792 ~ 15762315 (+)
G38852 NA non-coding upstream 229565 15673979 ~ 15755059 (+)
G39052 LOC101067125,LOC103386161,LOC103365890 non-coding downstream 210283 16195379 ~ 16195784 (+)
G39076 LOC104930492,LOC103358728,LOC102300171,LOC101465142 non-coding downstream 249918 16235014 ~ 16251725 (+)
G39113 NA non-coding downstream 518342 16503438 ~ 16510185 (+)
G39134 NA non-coding downstream 567588 16552684 ~ 16556205 (+)
G39143 NA non-coding downstream 593989 16579085 ~ 16579722 (+)
ccdc174 ccdc174 other upstream 10387 15965402 ~ 15974237 (+)
crbn crbn,LOC102793823 other upstream 47527 15923321 ~ 15937097 (+)
G38834 NA other upstream 336773 15645511 ~ 15647851 (+)
calcoco1b LOC104959845,LOC103376572 other upstream 1110165 14865059 ~ 14874459 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other upstream 1127555 14765297 ~ 14857069 (+)
eefsec eefsec,LOC102787825 other downstream 64582 16049678 ~ 16060330 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other downstream 164029 16149125 ~ 16158362 (+)
G39104 LOC103385912,LOC104930488,LOC103358732,LOC101079922 other downstream 448142 16433238 ~ 16435229 (+)
G39116 NA other downstream 532440 16517536 ~ 16543580 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other downstream 979521 16964617 ~ 17046696 (+)

Expression


Co-expression Network