G39116


Basic Information

Item Value
gene id G39116
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 16517536 ~ 16543580 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU52517
GAGAAGGTTGCTTCTAGCTGGAGGTGAGTCGAAAAGACCGGGCCTCAAGTGAACGGCTGTAGAACAGATGTCGCTAAACGAAGAACACTACGGAAAACAAAGGACCGAAAGACTTTCTTGTTTCCCCTACTACAAACTTTTGTATATACaccttttttttggtttttatcTGAACTGCAACAACAAAGGAGGAGCGGGGATGGCCCGGGGGAGGATGCAGACAGAACGGAGCCAATTAAAGCACCGGAGTGGTCCCCGAGGCAGTCATCGTCTTCAGAACGCTAACTATCACAGTCTGAGGGCACCATTGAGAGCATCCTGTCCAGCTGCATCACTGTGTGGTACGGGAGCGGCACTGCCTCCAACCGTAAGACCCTGCAGCGCATAGTGCAAGGCTGCTGGGCGGCTCATTGGTGTCCCACTCCCCTAACTCCTGGACATTTACCAATCCCGCCTCACCCGCAAAGCAACCAGCATTGTGGGTGACCTCAGCCTCCCCTCACACAGCCTCTTGCCATCTGGGAGACAGTACAGGAGCATCCAAGTCTGCTCCACCTGACTGGCAAACAGCTTCATTCCCCAGGCAGTCAGGAAGCTCAACACCGTTCCcgctctccctccccctctgccCCCAAGAACTCTGGACTCTgaaccccccgccccccccctccccccctgcaCTGGCCACTTTTAAAGAAGACACTCAGGAACTCTGTCTTTATATTGCACATTTCAAATATCTTCATCTTTAGTTTTCTGTACTGTTTGATTTTGGCTTAGATTTGCACTATTTAGaatttattactgtattgtatatattacttatctttctttatcttatttgtacatattacttatcttttttatctttatttgtagtattatttttttgattataCTTATATTATTATACTTATTGCACCGTGGGTTGGAGATAAACGTATTTTCAATTGCCCTGTATGTCTACaacatattgcagaattgataataaagttgacttgacttgacttgacttaaataaacatattttaaacaGACCTTAGCAGAGGTCTAGTCAACCAGAA
>TU52524
GAGAAGGTTGCTTCTAGCTGGAGGTGAGTCGAAAAGACCGGGCCTCAAGTGAACGGCTGTAGAACAGATGTCGCTAAACGAAGAACACTACGGAAAACAAAGGACCGAAAGACTTTCTTGTTTCCCCTACTACAAACTTTTGTATATACaccttttttttggtttttatcTGAACTGCAACAACAAAGGAGGAGCGGGGATGGCCCGGGGGAGGATGCAGACAGAACGGAGCCAATTAAAGCACCGGAGTGGTCCCCGAGGCAGTCATCGTCTTCAGAACGCTAACTATCACAGTCTGAGGTCAGTCCGTGACACCACGCAAACCCCTCCAGAAGTAAGAAAAGCATTGCACTCACCCTGGCTGGTTAGTCCCACACTCACATTGAACGCAACACATAGggaaaaggagacagaggaggaggggggtgtTACCGGCTAGGCTAACCTTTAGTAGCGGTGGTTTTTAACGAGCCCGGTTAGTTTAGCGTTCGTTCGTAACAAGCCtacaaaggggagagagagcatcTAGTCTTTCACCATGGCTACGAATCCATTTCAAACAAGCCAAGAGTTATACAAACATCCAAAACATTGCTTCATCTCTCACTGGGGCTCTGCATTGTAATTTTGATTCAGGCCATGGATGCTTAGTTAAATAAAGAGCAGTGCCTGAGTTTTTTCTAAGAAATATAATACTGTGGGGCTTACAGCAGTGCCATTTAATCTTTCACAGATATTAATACTCAGCCAGTTTCAGCACCATACAATGTAGCGCCATCAGGAAGAGGTGTCAAAACAGCACGAGGAAGACAAGGAGGGGAAAGTGTTGGTGTTGTCAGTGCTATCTGGTGAGATTACCCTCTGGAAACACCAGTCTGATTACTTTTGAGAAACATGCAACAAAACGGATCAACCTTACAGCTGGAAACTTCCTGAAAACAGGACATTCCCGGACATTTTAAATGCAGTAACACACGAAAGATCTAAATGAGTGTGTAAAGCTTTGACAGCCCATCAGTCAAATATTGTACCACCACCAAGTTTTAAATATATTCCACCCTAGAGCTTCATGTTTGCATGCTTATGCAGAATTCAGCCACCATAAATCCAAACAATGCCCGCGAGCTGAAATTATGGGGGGGGATACTTGGGTAATATCAAGCAGAATACATCTGTTCTCCCCAGTGGCAGGATATTCAGGCAAGATAAATCTGACTGGATGCTCAACAAAACTGACGGAAACGACACTACTACCACTACACGACACGCAGGCAATGAAATGGTGATGCTGGCGAAATTTCCTAAAAAGCAAGCTACTAGCCAGTCTACAAGCTTTACGGGCTGGAGatattctgtgtttttcttattaaataaataaaaagaccaaaacaagaGAGAGCATTCACTGCAGTGCAAACGTCAGAAGActtccagctaatttaaataaggTAGAAAAGGCATCTGCATGAAAATTTAAAATGATCAACCTGAAAGCTCCAGTCGCCTGTGACGTCATTATCCTGACAGACAATTCTGCTGCAGAGGCTTTTATATGTAAAGCCCCtcgtatatacagtacatacacccACTGATTCAAGGCAGAGAATCAACCACACAGAAACCATGTGGTTATTTTCTGCATCCATGATTGCAATTGCGCGAGTAAAGTGATTGCGAGTTCGCTATTAATCTCAGTCTATATTTATCAAACAAATCTGCGTCATCGGCGTCTGTGTCATAAGCGGGAACTGCTGCATGGTTAATACAGGACAATTACAATACAATTAGGTGCTATTTATGTGTGACGCAGGCCTCCGCTGGAAAGCGGGAAGAAAATGAGTCAGACAACATCTGTGAGCCGTAAGTCATTCTTCCAATCTGTAATCATGGAGTTAAATATTTAGTGTATCAAATGCATTTTAATATCTTACAAAAACAGGACGACCCCTGTGTTGGCCATGGCGTATGCCAGTCCTAGTATTCCACTTCCCATGATCGCATTGCCCAAGTTGAAGACCGACATCCCAAACGAGGTTTTCCCCTCAAACTATGACAGAAGCAGGACAGAAGAGAGGAATAAACATGTTAGATAATCTGATAATACATGCAGGTACTGCCTATATGAACTGTATATATGACACCACTGAGAAAGGTCGATTGGCTGTGTTTTACATCTGTAAAGTGAGTGGTCTTCTTTTCCTCCATGCCTGATAAGAACTCCTGGCTCTCTGGGAGGTTGGCCTCTGCATTCTCAGTTCTGTGGGGATTTCACCAGCCTCTGCAGGTGGTGTTATGGCCAATGCTGTGATCTCCTCCCCGGGCTCATGGCCTTTCCCATTCGGGATAGCGTTCCCTTCAGCAGTTTCCACAGTATCGGCTGGTTTATCCTCACTCATATCTGCTCTGGTGCCTCGGTGTGTATGTAATGAGTCTGTTGAAATGTGTAAATATTCAAGGCTGTGGTTCTAGTCGAGGTTGTATTTTCTTCCTGTGATCAGAGAAGTACCCGTGTCCTCATCCAACTCCAAATATCACCACACAGATCTTGCCTCCGCTTGCAGTGTCTTCCAGCCTCTGTCCCGCTACGTCCGTCCGCCTTCCCTCCAAACTGCGTTCatgtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52517 False 1064 lncRNA 0.46 2 16517536 16522337
TU52524 True 2622 TUCP 0.45 3 16517536 16543580

Neighbor

gene id symbol gene type direction distance location
arpc4 arpc4,LOC103358720,LOC100696600,LOC103385929,LOC107721188 coding upstream 350398 16161960 ~ 16167138 (+)
mustn1a mustn1 coding upstream 476323 16039813 ~ 16041213 (+)
rft1 rft1 coding upstream 478262 16035974 ~ 16039274 (+)
prkcda prkcd,LOC104933455 coding upstream 482574 16016979 ~ 16034962 (+)
LOC120558102 LOC104943766 coding upstream 506030 15991734 ~ 16011506 (+)
emc3 emc3,LOC101173295,LOC101079695 coding downstream 19285 16562865 ~ 16566395 (+)
usp4 usp4,LOC102796025 coding downstream 23121 16566701 ~ 16578215 (+)
fancd2 fancd2 coding downstream 40832 16584412 ~ 16605415 (+)
tex264a tex264,LOC102797020 coding downstream 62871 16606451 ~ 16681516 (+)
grm2a LOC103368479 coding downstream 140228 16683808 ~ 16716227 (+)
G39113 NA non-coding upstream 7351 16503438 ~ 16510185 (+)
G39076 LOC104930492,LOC103358728,LOC102300171,LOC101465142 non-coding upstream 265811 16235014 ~ 16251725 (+)
G39052 LOC101067125,LOC103386161,LOC103365890 non-coding upstream 321752 16195379 ~ 16195784 (+)
G38966 NA non-coding upstream 532440 15984624 ~ 15985096 (+)
LOC120557201 NA non-coding upstream 595914 15919385 ~ 15921622 (+)
G39134 NA non-coding downstream 9104 16552684 ~ 16556205 (+)
G39143 NA non-coding downstream 35505 16579085 ~ 16579722 (+)
G39195 NA non-coding downstream 238831 16782411 ~ 16782618 (+)
G39196 NA non-coding downstream 241168 16784748 ~ 16785065 (+)
G39197 NA non-coding downstream 242251 16785831 ~ 16786051 (+)
G39104 LOC103385912,LOC104930488,LOC103358732,LOC101079922 other upstream 82307 16433238 ~ 16435229 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other upstream 359174 16149125 ~ 16158362 (+)
eefsec eefsec,LOC102787825 other upstream 457206 16049678 ~ 16060330 (+)
ccdc174 ccdc174 other upstream 543299 15965402 ~ 15974237 (+)
crbn crbn,LOC102793823 other upstream 580439 15923321 ~ 15937097 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other downstream 421037 16964617 ~ 17046696 (+)
G39351 NA other downstream 568533 17112113 ~ 17119890 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other downstream 649571 17193151 ~ 17198217 (+)
LOC120557637 minos1,LOC103357934 other downstream 827903 17371483 ~ 17377560 (+)
G39581 LOC104949003,LOC103357913 other downstream 1064350 17607930 ~ 17609216 (+)

Expression


Co-expression Network