G39509


Basic Information

Item Value
gene id G39509
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17500063 ~ 17501224 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU53012
GCTCAATCTCCCACTGCTGGTGAGTCTCCCTCACTGCAGACAGCTCTCCACGCTGGGCCGAGGCTCGACTCTCACTCTGATCCCACTGCTTTTGTATCCTCTGAGTCTCTGCCTTTGCCCGCCCTCTCTCCTGAATGGCGGCCTCCTTCTCGTCCCTCTCGTGATCTCGCTCTCGCTGTGTGGACGCCACGGTCAGCTGAAGCTTCTCACAGTCCATCTGTAGGATCTGGTTGCTGCTCTGTGCTGCCTGCAAGGTCTTCTCCAAGCTCACCTTCTCACTGGCCAGTGTGTCTCTCTCCTGCTTCAGACggtccttctctctctgtgttgtctccctctctctctgagcAGCATCCTTTTCTCTCTGCAGAGCTTGGTTTCGCTGTTCTGCATCTCTTTTTGCCAAATCAGTCTCTGAAAGCTGCTTGCGCAACTGTTGAACCAAGGACTGGGCAGAAAGCAGACGCCCTCGAACATCCTGCAAACAACACAAGTGGGGTCACTTGCCTCTAGTAGTAGTAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53012 True 525 lncRNA 0.55 3 17500063 17501224

Neighbor

gene id symbol gene type direction distance location
mfap2 mfap2 coding upstream 13186 17480859 ~ 17486877 (+)
sdhb LOC106929635,LOC103130297,LOC107085616,LOC105927147,LOC103465156,LOC103357925 coding upstream 19971 17473313 ~ 17480092 (+)
LOC120557636 NA coding upstream 37341 17458924 ~ 17462722 (+)
ssu72 ssu72 coding upstream 42072 17452822 ~ 17457991 (+)
fndc10 NA coding upstream 48006 17449728 ~ 17452057 (+)
fbxo42 fbxo42 coding downstream 23791 17525015 ~ 17531451 (+)
slc25a34 slc25a34,LOC104928013 coding downstream 31841 17533065 ~ 17542138 (+)
LOC120557614 NA coding downstream 40984 17542208 ~ 17545551 (+)
fblim1 LOC104949010 coding downstream 48299 17549523 ~ 17555364 (+)
si:ch1073-335m2.2 LOC104949008,LOC103357917 coding downstream 56696 17557920 ~ 17578916 (+)
G39489 NA non-coding upstream 33467 17466087 ~ 17466596 (+)
G39484 NA non-coding upstream 35285 17463538 ~ 17464778 (+)
G39486 NA non-coding upstream 37813 17461864 ~ 17462250 (+)
G39434 NA non-coding upstream 104241 17351706 ~ 17395822 (+)
G39437 NA non-coding upstream 192356 17307055 ~ 17307707 (+)
G39516 NA non-coding downstream 9646 17510870 ~ 17512831 (+)
G39522 NA non-coding downstream 30298 17531522 ~ 17531924 (+)
G39533 NA non-coding downstream 88486 17589710 ~ 17590985 (+)
G39579 NA non-coding downstream 104599 17605823 ~ 17606816 (+)
G39580 LOC103357913,LOC102778940 non-coding downstream 105741 17606965 ~ 17607514 (+)
LOC120557637 minos1,LOC103357934 other upstream 122503 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 301846 17193151 ~ 17198217 (+)
G39351 NA other upstream 380173 17112113 ~ 17119890 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other upstream 453367 16964617 ~ 17046696 (+)
G39116 NA other upstream 956483 16517536 ~ 16543580 (+)
G39581 LOC104949003,LOC103357913 other downstream 106706 17607930 ~ 17609216 (+)
LOC120556838 NA other downstream 219217 17720441 ~ 17734011 (+)
wnk2 wnk2,LOC104946158 other downstream 403474 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 688358 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 714482 18215706 ~ 18226578 (+)

Expression


Co-expression Network