G39626 (LOC103357902)



Basic Information


Item Value
gene id G39626
gene name LOC103357902
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17684994 ~ 17686581 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU53179
TTTAACTTCATGCCGGTAGCCTATATCAAATACAGCAGACAGGAACACCAGTCATTGTTTCTCCATGATCTCAGCACACAAGCATAGTCTCACCTCTGGTGAGGAAGCCTCTTCTTTGGCAGAGTCTGGCGACTTGGCCTCTCTGGCAGAGTCTGGCAACTTGGCCTCTTCTTTGGCAGTGCCTTTCTTCGTGGTACCATTTTTTTTGACTTCTTGGCTCCATCCTTGGCTGCCTTTTGCACATTGGGATCCACGTTCTCAGCTTTGGGCTTTGCCTCCTTGACTGGTGCAAGCTTAAGACAggacaaCCTAAATTTTCCCTGTGCGCCTGTAGTGGCCGTAGAGTTAGCAGGACGCACTAACGTGCCAGTCTCCAGTCCTTTTTTCAGGGCTCTACGGACGAAATGCTTCAGCCTTACCAAATCCACCGAGGGgtatttttgtttaatgtaatTCTGTATCGCTTGGAATGAAACCCCTTTGCGCGAGTCCAACTCTTTAAGCGCTTCTTTCACCATAACTGCTGTGGAGGGATGGGCTGTAAGTTTGCGCAGCGCCGCAGCATCTGgtttttttctcttcctccgGGGCTTCACTGGAAGACGGCGCAGGTGGATCAGCAGCGGCGACGGCAGCTGCTGCCGCCACCGCTGCTGCCCTTTTAGGAGGCATTACTGAGAATTTAATATAaaagggaaacacaagacacaaaAATCAGCGTGTTACGCTAAGTCTAAAAGTATGCTATATCTGCACACGCAGCACGTCTGTCTTTATGCAGCTGCTTCCGGTAAAACAAAACCAGGTGATCAC
>TU53180
TTTAACTTCATGCCGGTAGCCTATATCAAATACAGCAGACAGGAACACCAGTCATTGTTTCTCCATGATCTCAGCACACAAGCATAGTCTCACCTCTGGTGAGGAAGCCTCTTCTTTGGCAGAGTCTGGCGACTTGGCCTCTCTGGCAGAGTCTGGCAACTTGGCCTCTTCTTTGGCAGTGCCTTTCTTCGTGGTACCTTTTTTTTTTTGACTTCTTGGCTCCATCCTTGGCTGCCTTTTGCACATTGGGATCCACGTTCTCAGCTTTGGGCTTTGCCTCCTTGACTGGTGCAAGCTTAAGACAggacaaccaaaaaaaaaaaagcccgaTAAATGACGTTATTTGATCAGCTTTGAAGCTGTAGACTTGACTTCTTACCCTAAATTTTCCCTGTGCGCCTGTAGTGGCCGTAGAGTTAGCAGGACGCACTAACGTGCCAGTCTCCAGTCCTTTTTTCAGGGCTCTACGGACGAAATGCTTCAGCCTTACCAAATCCACCGAGGGgtatttttgtttaatgtaatTCTGTATCGCTTGGAATGAAACCCCTTTGCGCGAGTCCAACTCTTTAAGCGCTTCTTTCACCATAACTGCTGTGGAGGGATGGGCTGTAAGTTTGCGCAGCGCCGCAGCATCTGgtttttttctcttcctccgGGGCTTCACTGGAAGACGGCGCAGGTGGATCAGCAGCGGCGACGGCAGCTGCTGCCGCCACCGCTGCTGCCCTTTTAGGAGGCATTACTGAGAATTTAATATAaaagggaaacacaagacacaaaAATCAGCGTGTTACGCTAAGTCTAAAAGTATGCTATATCTGCACACGCAGCACGTCTGTCTTTATGCAGCTGCTTCCGGTAAAACAAAACCAGGTGATCAC
>TU53181
CAAaagtataaaaacaataaatctaTTCTGCagtcttctttcctcttctcccagTTGCTTTAGCAGCAGGGGCGTCGCTGCCTGCTTTAGCAGCCTTGCTCAGAGTTGCATTTCCTGCCTTTGCATCCTTTGTGGTCTTCGCTACTTTAGTTTCGGCTGAGTCAGAGGCTTCCACATCAACCTTTTCTGCAGCTTTTTTAGCTTTTGGCTTCTTTGCTGGAGCAGCCTTTGAGGTAGcagcttctttttctttcttagaCCTTTTGGGAGCACCTCTGGTGAGGAAGCCTCTTCTTTGGCAGAGTCTGGCGACTTGGCCTCTCTGGCAGAGTCTGGCAACTTGGCCTCTTCTTTGGCAGTGCCTTTCTTCGTGGTACCTTTTTTTTGACTTCTTGGCTCCATCCTTGGCTGCCTTTTGCACATTGGGATCCACGTTCTCAGCTTTGGGCTTTGCCTCCTTGACTGGTGCAAGCTTAAGACAggacaaccaaaaaaaaaaaagcccgaTAAATGACGTTATTTGATCAGCTTTGAAGCTGTAGACTTGACTTCTTACCCTAAATTTTCCCTGTGCGCCTGTAGTGGCCGTAGAGTTAGCAGGACGCACTAACGTGCCAGTCTCCAGTCCTTTTTTCAGGGCTCTACGGACGAAATGCTTCAGCCTTACCAAATCCACCGAGGGgtatttttgtttaatgtaatTCTGTATCGCTTGGAATGAAACCCCTTTGCGCGAGTCCAACTCTTTAAGCGCTTCTTTCACCATAACTGCTGTGGAGGGATGGGCTGTAAGTTTGCGCAGCGCCGCAGCATCTGgtttttttctcttcctccgGGGCTTCACTGGAAGACGGCGCAGGTGGATCAGCAGCGGCGACGGCAGCTGCTGCCGCCACCGCTGCTGCCCTTTTAGGAGGCATTACTGAGAATTTAATATAaaagggaaacacaagacacaaaAATCAGCGTGTTACGCTAAGTCTAAAAGTATGCTATATCTGCACACGCAGCACGTCTGTCTTTATGCAGCTGCTTCCGGTAAAACAAAACCAGGTGATCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU53179 False 813 lncRNA 0.49 4 17685471 17686581
TU53180 False 884 lncRNA 0.48 3 17685471 17686581
TU53181 True 1061 lncRNA 0.48 4 17684994 17686581
Loading

Neighbor


gene id symbol gene type direction distance location
LOC120557621 NA coding upstream 773 17681239 ~ 17684221 (+)
tmcc1b LOC103357903,LOC102207997,LOC101484470,LOC100708690,LOC102775589 coding upstream 4561 17663261 ~ 17680433 (+)
LOC120557598 NA coding upstream 26369 17654623 ~ 17658625 (+)
LOC120557612 NA coding upstream 40089 17640646 ~ 17644905 (+)
LOC120557609 tmem43 coding upstream 67046 17610316 ~ 17617948 (+)
LOC120556839 NA coding downstream 4042 17690623 ~ 17698228 (+)
LOC120556837 NA coding downstream 19634 17706215 ~ 17719329 (+)
LOC120556840 LOC102792430,LOC100693756,LOC102298411,LOC101487248,LOC104946168,LOC102193684 coding downstream 82905 17769486 ~ 17780828 (+)
LOC120557367 LOC103359635,LOC102796318,LOC100691863,LOC101486295,LOC102211045 coding downstream 174765 17861346 ~ 17870786 (+)
LOC120557366 LOC103359651,LOC102211705,LOC101487058,LOC102294841,LOC102795823 coding downstream 187523 17874104 ~ 17888579 (+)
G39588 rhoaa,LOC106583462,LOC103374076,LOC105900164,LOC107679616,LOC105026930,LOC107591788,LOC108265880 non-coding upstream 62487 17620723 ~ 17622507 (+)
G39580 LOC103357913,LOC102778940 non-coding upstream 77480 17606965 ~ 17607514 (+)
G39579 NA non-coding upstream 78178 17605823 ~ 17606816 (+)
G39533 NA non-coding upstream 94009 17589710 ~ 17590985 (+)
G39522 NA non-coding upstream 153070 17531522 ~ 17531924 (+)
G39630 NA non-coding downstream 3223 17689804 ~ 17690576 (+)
G39633 NA non-coding downstream 28831 17715412 ~ 17722348 (+)
G39638 NA non-coding downstream 48905 17735486 ~ 17735906 (+)
G39654 NA non-coding downstream 98678 17785259 ~ 17785810 (+)
G39665 NA non-coding downstream 165935 17852516 ~ 17853366 (+)
G39581 LOC104949003,LOC103357913 other upstream 75778 17607930 ~ 17609216 (+)
LOC120557637 minos1,LOC103357934 other upstream 307434 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 486777 17193151 ~ 17198217 (+)
G39351 NA other upstream 565104 17112113 ~ 17119890 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other upstream 638298 16964617 ~ 17046696 (+)
LOC120556838 NA other downstream 33860 17720441 ~ 17734011 (+)
wnk2 wnk2,LOC104946158 other downstream 218117 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 503001 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 529125 18215706 ~ 18226578 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 1609678 19296259 ~ 19314826 (+)

Expression


G39626(LOC103357902) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 50.
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G39626(LOC103357902) Expression in each Bioproject

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G39626(LOC103357902) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network