G39638


Basic Information

Item Value
gene id G39638
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17735486 ~ 17735906 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU53197
GCATCCCCCCTCATCTCCCCTCAAATCGCCTACTGCTTATATGCAGACAAACACATGTCCTCATACCTCAGGGTGGAAAGGATGGCATGATTCAGGCTTTTTTCTGTCCTTCTGAAACTTCAGTCTGTCACATTTAAGTGACTCGATATACATGATCTCGATGGGATCCATGGTTACTGGAGGAGAACTGCTGCAGTCACACTTATTGTCCACAACAACCATGAAGAGGTTGCTGCTGGGAATCTGCTGTATGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53197 True 256 lncRNA 0.46 2 17735486 17735906

Neighbor

gene id symbol gene type direction distance location
LOC120556837 NA coding upstream 16157 17706215 ~ 17719329 (+)
LOC120556839 NA coding upstream 37258 17690623 ~ 17698228 (+)
LOC120557621 NA coding upstream 51265 17681239 ~ 17684221 (+)
tmcc1b LOC103357903,LOC102207997,LOC101484470,LOC100708690,LOC102775589 coding upstream 55053 17663261 ~ 17680433 (+)
LOC120557598 NA coding upstream 76861 17654623 ~ 17658625 (+)
LOC120556840 LOC102792430,LOC100693756,LOC102298411,LOC101487248,LOC104946168,LOC102193684 coding downstream 33580 17769486 ~ 17780828 (+)
LOC120557367 LOC103359635,LOC102796318,LOC100691863,LOC101486295,LOC102211045 coding downstream 125440 17861346 ~ 17870786 (+)
LOC120557366 LOC103359651,LOC102211705,LOC101487058,LOC102294841,LOC102795823 coding downstream 138198 17874104 ~ 17888579 (+)
card19 card19 coding downstream 153323 17889229 ~ 17894265 (+)
LOC120558252 NA coding downstream 157387 17893293 ~ 17893420 (+)
G39633 NA non-coding upstream 13138 17715412 ~ 17722348 (+)
G39630 NA non-coding upstream 44910 17689804 ~ 17690576 (+)
G39626 LOC103357902 non-coding upstream 48905 17684994 ~ 17686581 (+)
G39588 rhoaa,LOC106583462,LOC103374076,LOC105900164,LOC107679616,LOC105026930,LOC107591788,LOC108265880 non-coding upstream 112979 17620723 ~ 17622507 (+)
G39580 LOC103357913,LOC102778940 non-coding upstream 127972 17606965 ~ 17607514 (+)
G39654 NA non-coding downstream 49353 17785259 ~ 17785810 (+)
G39665 NA non-coding downstream 116610 17852516 ~ 17853366 (+)
G39861 NA non-coding downstream 712941 18448847 ~ 18452500 (+)
LOC120557393 NA non-coding downstream 808249 18544155 ~ 18547192 (+)
G39925 NA non-coding downstream 834685 18570591 ~ 18570983 (+)
LOC120556838 NA other upstream 1475 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 126270 17607930 ~ 17609216 (+)
LOC120557637 minos1,LOC103357934 other upstream 357926 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 537269 17193151 ~ 17198217 (+)
G39351 NA other upstream 615596 17112113 ~ 17119890 (+)
wnk2 wnk2,LOC104946158 other downstream 168792 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 453676 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 479800 18215706 ~ 18226578 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 1560353 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 1588923 19324829 ~ 19326625 (+)

Expression


Co-expression Network