G39654


Basic Information

Item Value
gene id G39654
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17785259 ~ 17785810 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU53220
GATaactattacattttatttgtgttcCTGGTGATGCTGTGTGCATATAGGATAAGACACACGTGTCAGCTCAAGATTTACACTCTAGCAATGATTGGATCCTACATGCCTCATATTATGTGGCatgatatttttgtgttttatctaAAATGTATAGGCTACAATGTATAAGTTGAACTTACATGCTGCAGGGGGTAAGATACCTTGAGGTGTGGCAGGAAGCAACCGTCTCTTTGGTGACCTCCGTGAGTCGCGGTAGAGAGGCTGCTCGTCATCGTCGTAGTAACTGTCGGGGTGATGGTAACCTTTGGGAGTCTCATACTCCGTGTCACTGTTCGGATACCTGTCCCCTGACAGCATACTGTCATCTTCATAAAACTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53220 True 383 lncRNA 0.44 2 17785259 17785810

Neighbor

gene id symbol gene type direction distance location
LOC120556840 LOC102792430,LOC100693756,LOC102298411,LOC101487248,LOC104946168,LOC102193684 coding upstream 4431 17769486 ~ 17780828 (+)
LOC120556837 NA coding upstream 65930 17706215 ~ 17719329 (+)
LOC120556839 NA coding upstream 87031 17690623 ~ 17698228 (+)
LOC120557621 NA coding upstream 101038 17681239 ~ 17684221 (+)
tmcc1b LOC103357903,LOC102207997,LOC101484470,LOC100708690,LOC102775589 coding upstream 104826 17663261 ~ 17680433 (+)
LOC120557367 LOC103359635,LOC102796318,LOC100691863,LOC101486295,LOC102211045 coding downstream 75536 17861346 ~ 17870786 (+)
LOC120557366 LOC103359651,LOC102211705,LOC101487058,LOC102294841,LOC102795823 coding downstream 88294 17874104 ~ 17888579 (+)
card19 card19 coding downstream 103419 17889229 ~ 17894265 (+)
LOC120558252 NA coding downstream 107483 17893293 ~ 17893420 (+)
LOC120557498 NA coding downstream 144672 17930482 ~ 17947838 (+)
G39638 NA non-coding upstream 49353 17735486 ~ 17735906 (+)
G39633 NA non-coding upstream 62911 17715412 ~ 17722348 (+)
G39630 NA non-coding upstream 94683 17689804 ~ 17690576 (+)
G39626 LOC103357902 non-coding upstream 98678 17684994 ~ 17686581 (+)
G39588 rhoaa,LOC106583462,LOC103374076,LOC105900164,LOC107679616,LOC105026930,LOC107591788,LOC108265880 non-coding upstream 162752 17620723 ~ 17622507 (+)
G39665 NA non-coding downstream 66706 17852516 ~ 17853366 (+)
G39861 NA non-coding downstream 663037 18448847 ~ 18452500 (+)
LOC120557393 NA non-coding downstream 758345 18544155 ~ 18547192 (+)
G39925 NA non-coding downstream 784781 18570591 ~ 18570983 (+)
G39926 NA non-coding downstream 787872 18573682 ~ 18573909 (+)
LOC120556838 NA other upstream 51248 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 176043 17607930 ~ 17609216 (+)
LOC120557637 minos1,LOC103357934 other upstream 407699 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 587042 17193151 ~ 17198217 (+)
G39351 NA other upstream 665369 17112113 ~ 17119890 (+)
wnk2 wnk2,LOC104946158 other downstream 118888 17904698 ~ 17930118 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 403772 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 429896 18215706 ~ 18226578 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 1510449 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 1539019 19324829 ~ 19326625 (+)

Expression


Co-expression Network