G39861


Basic Information

Item Value
gene id G39861
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 18448847 ~ 18452500 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU53572
ATTCAGATAATTTTCTATATTAATTTCCTTTAATTTAAGTAAACGTTGCAATCCCACACTATACAAATACTTTATTAGCTGTTAAATAAATGCAGTGAAGTTAAACGCACAACATTTCACACTGATATGTATAGTAGAATGAAATGGAAATTCTACTGTAAGTTCTACTGTAATATGGAAATGTCACATAGTTAGTATAAGCTCTTGTtcctcttttaggaaaagtagGGTGTTAACAAGACCGGGGAGACAGTTCAGGTTTGTAGGAAAACTACTACTTTTGGTTGTGTCTCATTAAATAAAAGTCCAGTCCAGGACTACACAAAAAACATGTGAACTCAAATACAATgcaaaataatttcaaaatcACCACAATATAAAATTTATTAATTTCTCATAGCATGAATATgatttgacaaaaaatgttttacattgCTTATACAAAGTCCACATAAAGTCAACTGACAACATGCACAATTTATGTTTGAAGTACTTGCATGATGGGAATTATATGCACAGGaatacaattttatttctatttttatatgCTTAAATAGCGTCTGTCAAAGATAGACGGTAAGACTAGAAGGGACTTGAACCAGACAGACTTGAAGGCGATCCTTTAATTTTAACTCAGTAACATTATGTGAACTTGGCCAGGAGTCATGACAAACTCTCTCCATGGAGGCCAGCTAGCAAGTTATTACATTGATTTGCACTTATGAAGCTGAAGTTAGCTTCCGATTCCGCGAGTTAAGGTGAAATTTAAGGGAAACTTAAAGCTGAAGTTAGCTTCCGATTCACAGCGTCCGATTCAGCAGGGAAACATAATTTACATTGCTGAGTGAGTGATCCTCCCTTTTTTTGAACCTCTTACtgtattgaatgagtgttagtcattaaggtaaataattaattatgtctaaaaaacacttttagatttgtgaaagctttgtTGTCTTTATGAGAATGCTATAAAGGGagatttcacagttttttttcatatgtagaccacattagACCAGGTCCAAATCCAAAACCActatacctagacttgtcaaatctggaccaaattatcccagagaggctaaagattcttaaaaacacagtttccaATTTGTGAAAGccttattctatttgtgaaagtGCAATAAAGTAGGGTTTCACAGTAttttcatatgtagaccacGTTAGACACATTAGAATAAGTTAATTCtttctttattgcattttcacaaatataataaagctttcactaatctgaaactgtgttttaaagaatctttagcctctctgggataatttggtccagatttgacaagtttgtggttttggatctggacctggtcttaTGTGGTTTACATATGAACAAGAACAGGAAAATCTCCCTTAAttgtattttcacaaatagaatcaagctttcacaaatctgaaactgtgtttttaagaatcTTTAGCCTCTCTGGTATAATTTGGTCcagatttgacaagtctagatatagtggttttggatctggacctggtcttatgtggtctacatatgaaaaaagggaaattttcctttattgcattttcacaaatagaatcaagctttcacaaatctgaaactgtgtttttaagaatctttagcctctgtgtctgtctctctctggctctggctctgtctctctcttctctctctctctctctctctctctctctctctctctctctctctgtagatgTGCAGCAAAAGTTTACCACTTACAAAACCACCATGCTACATAAGCAAACCAGAGGGTGATATAGTCAATGAAGTGAATCATTTCTACTTAGACATGGTATTGAAGGCTTTAAAGGCAAGACTTTTGATCTTACACAagatatgaatgaatgatatgTCATCCTGTCAACCTGTCAagtcaagttttattttgtataataataatttgtgcCAGAAATTTTAGATAAATGGGCTGACAACTGCGAGCTAGTTCAGGCAGGCAACTCGAGCTGCACCGCTGCATACACATGTgacacacttcacacactgtAAATTTTACCAAACACACCCCATTACTTCTTCTGACCACCAGAACAGAATCAGAAACTCATGTGCATGCACACTTTAActctcaaaaacacactccATAAAATCTATTATAAGGTAAATTATGTCACTGATACaggtaatgtaatataaaaagcatTCCCATAGGTATatgttatcttttttttttcccacacccATGTGGCAACCCCCGGAAATTATTTTGCGACTCCAAGGTAAAGAACCACGTGCTCAATGGCATACTGAAACATGAAAATGATGACTTTATCTGACAAATTACATGTTTGCTTTAACTGAAAATAGCTTTTAAAGTCTTCTCAATACTGTTCGGTCTACAGCAGACACATTTTGTACACAAGACTGATTGTGCACGTTGCAGACTGGTATGGTAACCCAGCAGAACTGGAAGTCATTATTTCTAAAACATGCTTAGCTTGCTTATCACATTTAAAACTTAATcaaaaatgttcagtttttcaCATTTGCAACTCCATCTCAGCTCCGCCACTTGCTTTGTTTTCATTTGCAACAGGAGTGTCGTCTGGATTTAAAGGGCATTGCTCAGGTTGCTTTGCGGTGTGGTGCATCTTGTTTTCAGGGCGGCAAAGCTGCCTGATGTTCTGTAGAAACAATCAGTCATCACTTCACATTAGACAAAACGTTGATATGCAGTGCAGGTTTCCCAAACTGctcaacagaaacacacagaaaaggaGGGAATAAACAACGCCAACAGCATTAAGGCTCATTCGCTGCTACTTATGTCAAGTTGAGTATGCAGCTGCAACTCGCTGGAAGCACGTCTGGCTGGAGGGCTTTGTTAACACATTGCTATTCCCTTTGAAAGCTTTCATAACTCCTGTATGTATGTAATTGGACCCTGATGCTTGTTGTAAAACAGTACTTGTACTGTTATGCAACCATGTTGCatagaatattttgttcttgaGTAAccaagcttttatttttctgcaaTATAGAACTGAGCTGTTATGTCACCAtgattctgatttataaagAGAAATACAaagttgttttcttcattgcctCAAATTAACTAAACTAATTGAATGGCTTAAAAGGACAGTACATGGTACTGGAAAAAGTATTAGCTacattcattatttgtattaagGCAACACTAGAGAAGTTTTTgtaacttaaaataatgtttcaaaaatcgtttcagtggttcatcatcTCGTAACAGGGTgtacggcacttctgcattcgcttaGCGGCCCTCTATCaactataaccgcactatgcaagtttgccagatcaggtagcggatctgtagttcgaatgagacataatgggaCAACTCAGTTTCCaagctgtagggggaccaaagcaggtaaagttctctagtgttgctttggtaacactttacaataaggtacacaaaaaatagatagttaatgatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53572 True 3478 lncRNA 0.36 2 18448847 18452500

Neighbor

gene id symbol gene type direction distance location
ppil1 ppil1,LOC102783931 coding upstream 20249 18424507 ~ 18428598 (+)
si:ch211-157b11.14 NA coding upstream 57191 18384593 ~ 18391656 (+)
c4h1orf159 LOC104931340,LOC103359840,LOC101474389,LOC108231181,LOC102786121,LOC107100091,LOC102306124 coding upstream 65752 18376550 ~ 18383095 (+)
kbtbd12 kbtbd12,LOC103464606 coding upstream 76945 18367978 ~ 18371902 (+)
p4htm LOC103359812,LOC100700943 coding upstream 94006 18345749 ~ 18354841 (+)
tspo tspo coding downstream 62798 18515298 ~ 18517711 (+)
tomm6 NA coding downstream 69259 18521759 ~ 18523086 (+)
c4h1orf74 LOC104948860 coding downstream 70655 18523155 ~ 18524040 (+)
eif4enif1 eif4enif1 coding downstream 97476 18549976 ~ 18564635 (+)
patz1 patz1 coding downstream 113401 18565901 ~ 18579863 (+)
G39665 NA non-coding upstream 595481 17852516 ~ 17853366 (+)
G39654 NA non-coding upstream 663037 17785259 ~ 17785810 (+)
G39638 NA non-coding upstream 712941 17735486 ~ 17735906 (+)
G39633 NA non-coding upstream 726499 17715412 ~ 17722348 (+)
G39630 NA non-coding upstream 758271 17689804 ~ 17690576 (+)
LOC120557393 NA non-coding downstream 91655 18544155 ~ 18547192 (+)
G39925 NA non-coding downstream 118091 18570591 ~ 18570983 (+)
G39926 NA non-coding downstream 121182 18573682 ~ 18573909 (+)
G39927 NA non-coding downstream 121482 18573982 ~ 18574211 (+)
G39934 NA non-coding downstream 146524 18599024 ~ 18599229 (+)
LOC120557740 acy1 other upstream 222269 18215706 ~ 18226578 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other upstream 253936 18189582 ~ 18194911 (+)
wnk2 wnk2,LOC104946158 other upstream 518729 17904698 ~ 17930118 (+)
LOC120556838 NA other upstream 714836 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 839631 17607930 ~ 17609216 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 843759 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 872329 19324829 ~ 19326625 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 972366 19424866 ~ 19426456 (+)
slc38a3b LOC103360384 other downstream 989508 19442008 ~ 19470998 (+)
LOC120557344 LOC104966310 other downstream 1164681 19617181 ~ 19632519 (+)

Expression


Co-expression Network