G39925


Basic Information

Item Value
gene id G39925
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 18570591 ~ 18570983 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU53668
ctttCACATATTAGAGGAATTatcgtatagtacaggagaagctcgtaggcggtttcgacttacatgagctgtttaggtttaatgactaatgttaactagcatgttagttagcaataattagcctgtgcctatgttatctccttacatatacctacgctctccgtctctgcaagattgggaatgattgagatttctcttggcacagctaccagaagacttacaactttcagacaggttgctcacgtcacatttatgtCGTCTCTcccagttggaggctgcgcagtaacgctcagcgctcaccggaaaagtgcttcaaatATCCCATTGCTCTGGTCTACGTCCAGagcaatgggatctgttggtccattattatatactgtctatgctcccgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53668 True 393 lncRNA 0.44 1 18570591 18570983

Neighbor

gene id symbol gene type direction distance location
eif4enif1 eif4enif1 coding upstream 5956 18549976 ~ 18564635 (+)
c4h1orf74 LOC104948860 coding upstream 46551 18523155 ~ 18524040 (+)
tomm6 NA coding upstream 47505 18521759 ~ 18523086 (+)
tspo tspo coding upstream 52880 18515298 ~ 18517711 (+)
ppil1 ppil1,LOC102783931 coding upstream 141993 18424507 ~ 18428598 (+)
tgfa tgfa,LOC102305789,LOC107385163 coding downstream 22181 18593164 ~ 18598375 (+)
trub2 trub2,LOC102777509 coding downstream 40640 18611623 ~ 18615957 (+)
LOC120556859 NA coding downstream 68876 18639859 ~ 18645117 (+)
fkbp5 fkbp5,LOC102778077,LOC101485431 coding downstream 80322 18651305 ~ 18664585 (+)
LOC120557639 LOC101468781,LOC102197536,LOC100705767,LOC102779027 coding downstream 141957 18712940 ~ 18722231 (+)
LOC120557393 NA non-coding upstream 23399 18544155 ~ 18547192 (+)
G39861 NA non-coding upstream 118091 18448847 ~ 18452500 (+)
G39665 NA non-coding upstream 717225 17852516 ~ 17853366 (+)
G39654 NA non-coding upstream 784781 17785259 ~ 17785810 (+)
G39638 NA non-coding upstream 834685 17735486 ~ 17735906 (+)
G39926 NA non-coding downstream 2699 18573682 ~ 18573909 (+)
G39927 NA non-coding downstream 2999 18573982 ~ 18574211 (+)
G39934 NA non-coding downstream 28041 18599024 ~ 18599229 (+)
G39935 NA non-coding downstream 30733 18601716 ~ 18603100 (+)
G40049 NA non-coding downstream 417461 18988444 ~ 18988684 (+)
LOC120557740 acy1 other upstream 344013 18215706 ~ 18226578 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other upstream 375680 18189582 ~ 18194911 (+)
wnk2 wnk2,LOC104946158 other upstream 640473 17904698 ~ 17930118 (+)
LOC120556838 NA other upstream 836580 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 961375 17607930 ~ 17609216 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 725276 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 753846 19324829 ~ 19326625 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 853883 19424866 ~ 19426456 (+)
slc38a3b LOC103360384 other downstream 871025 19442008 ~ 19470998 (+)
LOC120557344 LOC104966310 other downstream 1046198 19617181 ~ 19632519 (+)

Expression


Co-expression Network