G40109


Basic Information

Item Value
gene id G40109
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 19173149 ~ 19178937 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU53937
tttttatttaaaatattaataacaaACAAGTTAAATATGATAGATGCACTGAGTAAACATAATagtataaatacagtacatataacAAAACGCTTTATCAATCAACAATTTTACAGTTATATACAGTTCATTCAAATGATGGAGTCATTTCATCTATGTGTCTTCTTAAGTCTGTATCGGACCTGGAGATCTCCGTCCGGCTGGAGCATCCCAAAGCCGTAGCGACTGGGATTAGCTGGTGGCAGTTTAGCCTCTGGGTCGCACATCTCCAGATCAAGGAAGTGATGGTAGCTCTGCTGCCAGGAGTTTGAATCTGACCCTTCGCTCAGCCAGTTCGGGGACAGCAGCTCCCACAGTCGCTCCCGTGATAAGTTGGCTGTCTTGCTTTCCCCTGTTGAAGAGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53937 True 405 lncRNA 0.43 2 19173149 19178937

Neighbor

gene id symbol gene type direction distance location
si:dkey-7k24.5 LOC103360585 coding upstream 36663 19130277 ~ 19136486 (+)
stau1 stau1 coding upstream 49743 19109380 ~ 19123406 (+)
pbrm1l LOC103360180,LOC102204824,LOC102785351,LOC101477452 coding upstream 63919 19096113 ~ 19109230 (+)
LOC120556926 fam107a coding upstream 103175 19063609 ~ 19069974 (+)
si:dkeyp-67f1.2 NA coding upstream 110238 19060361 ~ 19062911 (+)
LOC120556929 LOC104920520,LOC103360254 coding downstream 7488 19186425 ~ 19225219 (+)
rrp9 NA coding downstream 155597 19334534 ~ 19342023 (+)
LOC120557156 LOC104965620,LOC101472531,LOC100534483,LOC103360354 coding downstream 243123 19422060 ~ 19423856 (+)
rbm5 NA coding downstream 248336 19427273 ~ 19437025 (+)
gnai2b LOC108231398,LOC103360398,LOC100707363 coding downstream 294451 19473388 ~ 19528747 (+)
G40104 LOC102787023,LOC103360233,LOC102206431,LOC101476705 non-coding upstream 3758 19168836 ~ 19169391 (+)
G40073 NA non-coding upstream 96112 19075740 ~ 19077037 (+)
G40064 NA non-coding upstream 114571 19054128 ~ 19058578 (+)
G40049 NA non-coding upstream 184465 18988444 ~ 18988684 (+)
G39935 NA non-coding upstream 570049 18601716 ~ 18603100 (+)
G40139 NA non-coding downstream 66836 19245773 ~ 19248346 (+)
G40182 NA non-coding downstream 195693 19374630 ~ 19374839 (+)
G40284 NA non-coding downstream 582236 19761173 ~ 19762498 (+)
G40339 NA non-coding downstream 889341 20068278 ~ 20121870 (+)
G40352 NA non-coding downstream 967798 20146735 ~ 20146983 (+)
LOC120557740 acy1 other upstream 946571 18215706 ~ 18226578 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other upstream 978238 18189582 ~ 18194911 (+)
wnk2 wnk2,LOC104946158 other upstream 1243031 17904698 ~ 17930118 (+)
LOC120556838 NA other upstream 1439138 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 1563933 17607930 ~ 17609216 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 117322 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 145892 19324829 ~ 19326625 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 245929 19424866 ~ 19426456 (+)
slc38a3b LOC103360384 other downstream 263071 19442008 ~ 19470998 (+)
LOC120557344 LOC104966310 other downstream 438244 19617181 ~ 19632519 (+)

Expression


Co-expression Network