G40182


Basic Information

Item Value
gene id G40182
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 19374630 ~ 19374839 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU54035
CCCACCCCAAAAGTTCATCCTTGCTTAATGGATATTCTGTTTTATTACAACTCAGTTCTTATTTTCATACTTTTGGCCATTATTTCTATTGGTTATGATAACATTGTAGTCGTAATGTATAATGTAATTGCATAGCAACATGGCTACATAAAGTCCAAAGTGGCAAGAAACCCAAGCAGTCAGACAATCAAATACAAGCCAAGCCTTGTA

Function

NR:

description
PREDICTED: BMP/retinoic acid-inducible neural-specific protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54035 True 210 lncRNA 0.35 1 19374630 19374839

Neighbor

gene id symbol gene type direction distance location
rrp9 NA coding upstream 32607 19334534 ~ 19342023 (+)
LOC120556929 LOC104920520,LOC103360254 coding upstream 149411 19186425 ~ 19225219 (+)
si:dkey-7k24.5 LOC103360585 coding upstream 238144 19130277 ~ 19136486 (+)
stau1 stau1 coding upstream 251224 19109380 ~ 19123406 (+)
pbrm1l LOC103360180,LOC102204824,LOC102785351,LOC101477452 coding upstream 265400 19096113 ~ 19109230 (+)
LOC120557156 LOC104965620,LOC101472531,LOC100534483,LOC103360354 coding downstream 47221 19422060 ~ 19423856 (+)
rbm5 NA coding downstream 52434 19427273 ~ 19437025 (+)
gnai2b LOC108231398,LOC103360398,LOC100707363 coding downstream 98549 19473388 ~ 19528747 (+)
inka1b LOC103360405,LOC104965615 coding downstream 157498 19532337 ~ 19534915 (+)
LOC120557413 mst1r coding downstream 199303 19574142 ~ 19588616 (+)
G40139 NA non-coding upstream 126284 19245773 ~ 19248346 (+)
G40109 NA non-coding upstream 195693 19173149 ~ 19178937 (+)
G40104 LOC102787023,LOC103360233,LOC102206431,LOC101476705 non-coding upstream 205239 19168836 ~ 19169391 (+)
G40073 NA non-coding upstream 297593 19075740 ~ 19077037 (+)
G40064 NA non-coding upstream 316052 19054128 ~ 19058578 (+)
G40284 NA non-coding downstream 386334 19761173 ~ 19762498 (+)
G40339 NA non-coding downstream 693439 20068278 ~ 20121870 (+)
G40352 NA non-coding downstream 771896 20146735 ~ 20146983 (+)
G40357 NA non-coding downstream 782015 20156854 ~ 20157525 (+)
G40433 NA non-coding downstream 852498 20227337 ~ 20227816 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other upstream 48005 19324829 ~ 19326625 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other upstream 59804 19296259 ~ 19314826 (+)
LOC120557740 acy1 other upstream 1148052 18215706 ~ 18226578 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other upstream 1179719 18189582 ~ 18194911 (+)
wnk2 wnk2,LOC104946158 other upstream 1444512 17904698 ~ 17930118 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 50027 19424866 ~ 19426456 (+)
slc38a3b LOC103360384 other downstream 67169 19442008 ~ 19470998 (+)
LOC120557344 LOC104966310 other downstream 242342 19617181 ~ 19632519 (+)
sema3fa LOC103360486,LOC102793610,LOC100701195,LOC102213718,LOC102288772,LOC101468868 other downstream 312832 19687671 ~ 19741389 (+)
cenps LOC103362653,LOC103137101,LOC103464519 other downstream 476709 19851548 ~ 19859341 (+)

Expression


Co-expression Network