G40339


Basic Information

Item Value
gene id G40339
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 20068278 ~ 20121870 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU54235
atacacacacacatatacatacatatatatatatatataaaaaataaaagaaggtaataatacatttacaggaGACAACAAACTCATGTCTCTGAGCCAAACAAGGCCCGGTCTATCTCCGgttcatttttacactttttacaGACTTTTCTGCTATTTATTAGACAAATACTGTGATTGGATTACCTCGCTCAAGAAAAGTCTTTTATCGGTTTGGAGCAGCTCTCACCGCCCCACCCTGGGTAACACCTGCACTGAAACTTAGACTTAATGAACGTCACCTCATGTGTTCTCATCTGTCCTACAACTCTGTAGTTCTGCCCTCCCTCTGGTTTCTTCTCAGACAACACATTCCACACGGCAGGGTCCAGGTGGAGGTAGGCGCTTGAGTTCGGGTTCCTCCTCTGGCATCTTCCCTGAGAGGAACACATTGTCTGGCTGCAAAGAGCGGCCGCTGCGGTTACGTTGACCAGGTATGGACCCAGAGTCTCGTCGATGTAGGATTTTACAGCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54235 True 515 lncRNA 0.44 2 20068278 20121870

Neighbor

gene id symbol gene type direction distance location
si:ch211-161c3.5 calml6,c5h3orf18,clg5h3orf18,LOC104956351 coding upstream 179546 19877422 ~ 19888732 (+)
rbp7b rbp7,LOC104956357,LOC103362661 coding upstream 216749 19849826 ~ 19851529 (+)
h6pd h6pd coding upstream 220924 19839164 ~ 19847354 (+)
si:ch73-15b2.5 NA coding upstream 258414 19805357 ~ 19809864 (+)
ddi2 ddi2,LOC103362592 coding upstream 264121 19795354 ~ 19804157 (+)
hemk1 hemk1 coding downstream 39499 20161369 ~ 20167791 (+)
glyctk glyctk coding downstream 65785 20187655 ~ 20195749 (+)
mon1bb NA coding downstream 76119 20197989 ~ 20203853 (+)
si:dkey-183j2.10 LOC104951540,LOC103362943 coding downstream 96696 20218566 ~ 20224017 (+)
ppcs ppcs coding downstream 379759 20501629 ~ 20504671 (+)
G40284 NA non-coding upstream 305780 19761173 ~ 19762498 (+)
G40182 NA non-coding upstream 693439 19374630 ~ 19374839 (+)
G40139 NA non-coding upstream 819932 19245773 ~ 19248346 (+)
G40109 NA non-coding upstream 889341 19173149 ~ 19178937 (+)
G40104 LOC102787023,LOC103360233,LOC102206431,LOC101476705 non-coding upstream 898887 19168836 ~ 19169391 (+)
G40352 NA non-coding downstream 24865 20146735 ~ 20146983 (+)
G40357 NA non-coding downstream 34984 20156854 ~ 20157525 (+)
G40433 NA non-coding downstream 105467 20227337 ~ 20227816 (+)
G40442 NA non-coding downstream 143970 20265840 ~ 20266366 (+)
G40479 NA non-coding downstream 297270 20419140 ~ 20423496 (+)
abhd14b abhd14b other upstream 144729 19917889 ~ 19923549 (+)
cenps LOC103362653,LOC103137101,LOC103464519 other upstream 208937 19851548 ~ 19859341 (+)
sema3fa LOC103360486,LOC102793610,LOC100701195,LOC102213718,LOC102288772,LOC101468868 other upstream 326889 19687671 ~ 19741389 (+)
LOC120557344 LOC104966310 other upstream 435759 19617181 ~ 19632519 (+)
slc38a3b LOC103360384 other upstream 597280 19442008 ~ 19470998 (+)
G40353 rassf1,LOC102778369 other downstream 26234 20148104 ~ 20148690 (+)
vgll4b vgll4 other downstream 1173232 21295102 ~ 21343711 (+)
itga7 itga7 other downstream 1828506 21950376 ~ 21992611 (+)
cbfa2t2 cbfa2t2 other downstream 3613078 23734948 ~ 23771932 (+)
znfx1 NA other downstream 3726177 23848047 ~ 23867512 (+)

Expression


Co-expression Network