G41308


Basic Information

Item Value
gene id G41308
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 23846793 ~ 23847938 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU55574
CACCTGGTTATAGTCTTTGTTATTCTCCCGCTCTACAGTTTCTAGACAAGACATGTCACTATCAGCAATATCATTCACTAGTCAAATACTATTGGATATCTTGCACCTGCTAAGACTCTGTTTGTTAACATTTGTCATGCATAGTGGGAAAGGGAACTATGAATTCTATATTGCTCGGATTGTGCATATATAGGCTACGTATATTACCTGGCTCTTGTTCCAAGACGTGAGGAGGGACGTTGAGAAGCCGAGGCCAGACTTGACAGCGTATCTCATCAGTCAGCAGACCTCCTTCACTGATAGCCATCCTCCTCAAAGCAGCCACATCCACTGGACTCGCACTAAGGGCCTGTTTGATGTCCGCAATTTTCCTCTTCCGTCTGGTATCCCAGTCTGagacacagaaaacactgtGTTCAACTAACAAGTTGGCCTGTGCTTACTTTTATCCTGGAACAGTTATCGTTAAGCAGCTAACGTCACCGTGACGAGGCACCAGCACTTCTAGATGTATTCATTGTTTCTCCAGTTCTTGATGTGTCCTTGCTAATTTGCATTACTTGCCATCCTCCTTTGCTTGGCCAACCTCGAGTTAGCCCTTCATGGCTGTCAACTGGAAGCTGCAAGGCCAGCCTCATACAAACACGGCCcgatagttagctagctagctattcagtgttagctagctagttgtcaTACTAACTCTACCGTTACACAGCCCTGCTATTTTCGGCGACACAGCCATCATTATTCGTACTATTGACACACTGGTTAACAATTAGTAAACGCCGCTTAATAGCAATACGGTTACACCCGTGGAACGGCTACATGTTTACATTGACAAAAGCGACTAATAAATAGGATACAAGCTTTAGCTTTAGCTAGCCTCCCTGCTCAGACTGACTGATGATGACGTAGGTCAAAATGATGGCGATGATGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55574 True 942 lncRNA 0.45 2 23846793 23847938

Neighbor

gene id symbol gene type direction distance location
rbck1 rbck1 coding upstream 10825 23825726 ~ 23835968 (+)
tox2 tox2,LOC104948894,LOC108231505 coding upstream 181180 23571602 ~ 23665613 (+)
LOC120557289 wnt2b,LOC104945808 coding upstream 342088 23493752 ~ 23504705 (+)
cttnbp2nla cttnbp2nl,LOC102311171,LOC100709543 coding upstream 358806 23473348 ~ 23487987 (+)
LOC120557228 rap1b,rap1a,rap1ab,LOC105901888,LOC106566052,LOC107560426,LOC107742898 coding upstream 539727 23282142 ~ 23307066 (+)
LOC120558070 cdh22 coding downstream 124455 23972393 ~ 24165819 (+)
gcnt7 gcnt7,LOC102795321,LOC102207891 coding downstream 593374 24441312 ~ 24449369 (+)
eya2 eya2,LOC103355465,LOC102207428 coding downstream 642921 24490859 ~ 24521308 (+)
rdh5 rdh5,LOC104964277 coding downstream 713767 24561705 ~ 24567422 (+)
gls2b LOC103355460,LOC104964278 coding downstream 720553 24568491 ~ 24583147 (+)
G41291 NA non-coding upstream 9890 23836698 ~ 23836903 (+)
G41231 NA non-coding upstream 478442 23367385 ~ 23368351 (+)
G41220 NA non-coding upstream 488708 23337333 ~ 23358085 (+)
G41207 NA non-coding upstream 565600 23280937 ~ 23281193 (+)
G41126 NA non-coding upstream 591266 23254942 ~ 23255527 (+)
LOC120556870 NA non-coding downstream 20433 23868371 ~ 23870584 (+)
G41346 NA non-coding downstream 428122 24276060 ~ 24276910 (+)
G41354 NA non-coding downstream 571263 24419201 ~ 24421883 (+)
G41360 NA non-coding downstream 588444 24436382 ~ 24451569 (+)
LOC120557758 NA non-coding downstream 604683 24452621 ~ 24454019 (+)
cbfa2t2 cbfa2t2 other upstream 74861 23734948 ~ 23771932 (+)
itga7 itga7 other upstream 1854182 21950376 ~ 21992611 (+)
vgll4b vgll4 other upstream 2503082 21295102 ~ 21343711 (+)
G40353 rassf1,LOC102778369 other upstream 3698103 20148104 ~ 20148690 (+)
abhd14b abhd14b other upstream 3923244 19917889 ~ 19923549 (+)
znfx1 NA other downstream 109 23848047 ~ 23867512 (+)
bloc1s1 bloc1s1,LOC102796612 other downstream 707587 24555525 ~ 24560318 (+)
slc12a5a LOC103355988 other downstream 1360218 25208156 ~ 25310553 (+)
slc16a1a slc16a1,LOC102208676,LOC102781600 other downstream 1834469 25682407 ~ 25690935 (+)
LOC120558082 kcna10,LOC104941363 other downstream 1919154 25767092 ~ 25872919 (+)

Expression


Co-expression Network