G41441


Basic Information

Item Value
gene id G41441
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 24921636 ~ 24921851 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU55739
GTGACAGTGTTGTTAGTGATTGGTTGTGTTGTTCAGTTGGCAGACAGCCACCtggctatatataaatatgacaTTTGAGATGTGTGTTTGACTGGCAGAGGGCTTTTCACTGATCTTTGAATAGTGCTGAGAGGGCAGAACACTTACTTGACAACCTCCCAATCCCCTACTCAACCCCACTACTTTCTTTATAAAGcacatttgaaaatgaatggg

Function

GO:

id name namespace
GO:0050953 sensory perception of light stimulus biological_process
GO:0007601 visual perception biological_process

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU55739 True 216 lncRNA 0.42 1 24921636 24921851

Neighbor

gene id symbol gene type direction distance location
rab22a rab22a coding upstream 260 24909084 ~ 24921376 (+)
LOC120556805 bcdin3d,LOC102799648 coding upstream 30222 24888607 ~ 24891414 (+)
cers5 cers5 coding upstream 35607 24866174 ~ 24886029 (+)
LOC120557580 gpd1,LOC102799081 coding upstream 57542 24859261 ~ 24864094 (+)
smarcd1 smarcd1 coding upstream 63179 24827806 ~ 24858457 (+)
LOC120557917 vapb,LOC101078863,LOC108231687,LOC103355448 coding downstream 1988 24923839 ~ 24946743 (+)
LOC120558032 NA coding downstream 193067 25114918 ~ 25120366 (+)
capza1a LOC104945687,LOC106582739 coding downstream 401543 25323394 ~ 25329667 (+)
mov10a LOC103356046,LOC100704454,LOC101471942,LOC102210509,LOC102290565 coding downstream 409297 25331148 ~ 25345776 (+)
tafa3a fam19a3,LOC106517667,LOC104918365,LOC102289964,LOC101471348 coding downstream 483629 25405480 ~ 25523601 (+)
G41375 itch,LOC104964281,LOC107681287,LOC101070007,LOC108231686,LOC103355463 non-coding upstream 379483 24540909 ~ 24542153 (+)
G41368 NA non-coding upstream 398029 24521599 ~ 24523607 (+)
LOC120557758 NA non-coding upstream 467617 24452621 ~ 24454019 (+)
G41360 NA non-coding upstream 470067 24436382 ~ 24451569 (+)
G41354 NA non-coding upstream 499753 24419201 ~ 24421883 (+)
G41518 NA non-coding downstream 100607 25022458 ~ 25022749 (+)
LOC120557911 NA non-coding downstream 130985 25052836 ~ 25065136 (+)
G41539 NA non-coding downstream 163563 25085414 ~ 25085842 (+)
LOC120558031 NA non-coding downstream 177436 25099287 ~ 25113176 (+)
G41570 NA non-coding downstream 391868 25313719 ~ 25314259 (+)
bloc1s1 bloc1s1,LOC102796612 other upstream 361318 24555525 ~ 24560318 (+)
znfx1 NA other upstream 1054124 23848047 ~ 23867512 (+)
cbfa2t2 cbfa2t2 other upstream 1149704 23734948 ~ 23771932 (+)
itga7 itga7 other upstream 2929025 21950376 ~ 21992611 (+)
vgll4b vgll4 other upstream 3577925 21295102 ~ 21343711 (+)
slc12a5a LOC103355988 other downstream 286305 25208156 ~ 25310553 (+)
slc16a1a slc16a1,LOC102208676,LOC102781600 other downstream 760556 25682407 ~ 25690935 (+)
LOC120558082 kcna10,LOC104941363 other downstream 845241 25767092 ~ 25872919 (+)
LOC120558088 LOC104941431 other downstream 982918 25904769 ~ 25907738 (+)
G41825 NA other downstream 1346751 26268602 ~ 26273315 (+)

Expression


Co-expression Network