G41927


Basic Information

Item Value
gene id G41927
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 26938477 ~ 26938745 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU56412
GTGCATTCTCAGATGGTACTTGAAAGAGACTTTGCTATTCATTTTACGTATATTCAGCGGGCAATTATTCCAATGATTGATAAATAACTGTTCTCTTTTAAAGCATTTGATTTTGGGCGTGGGAAACATAATCTGGCCATCATCAGCTGATCTAGTCAAATGAGAATTAACCTGATCACACCTAACAATTTGGTTACATAAGAAAACAGGTTGAGAAGAAAAGACAGTATTTCTGAAAAATGTAGTTGTATTGAAAACCAGCCTGTTCT

Function

GO:

id name namespace
GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient biological_process

KEGG:

id description
ko05012 Parkinson disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU56412 True 269 lncRNA 0.35 1 26938477 26938745

Neighbor

gene id symbol gene type direction distance location
slc2a1b slc2a1,LOC108231650,LOC104928076 coding upstream 123075 26790484 ~ 26815402 (+)
snrpc NA coding upstream 304825 26630429 ~ 26633652 (+)
pacsin1b LOC104965611,LOC103355721 coding upstream 352884 26550817 ~ 26585593 (+)
nudt3b nudt3 coding upstream 397515 26531513 ~ 26540962 (+)
LOC120557651 LOC107089162,LOC104944127,LOC103355802 coding upstream 768392 26129594 ~ 26170085 (+)
lrig2 lrig2,LOC102799082 coding downstream 44515 26983260 ~ 27008409 (+)
LOC120556972 magi3,LOC103355560,LOC100702300,LOC101472626,LOC102212608 coding downstream 72653 27011398 ~ 27153146 (+)
im:7151449 NA coding downstream 219992 27158737 ~ 27169707 (+)
LOC120558010 LOC103355483,LOC108231584 coding downstream 408250 27346995 ~ 27348100 (+)
phtf1 phtf1 coding downstream 410168 27348913 ~ 27364609 (+)
G41865 tcp11 non-coding upstream 228900 26707269 ~ 26709577 (+)
LOC120557964 NA non-coding upstream 533575 26400453 ~ 26404902 (+)
G41835 NA non-coding upstream 593018 26344137 ~ 26345459 (+)
G41834 LOC104955002 non-coding upstream 600273 26324805 ~ 26338204 (+)
G41827 LOC106518302,LOC101482215,LOC102196619,LOC102290668 non-coding upstream 662548 26275122 ~ 26275929 (+)
LOC120558213 NA non-coding downstream 255427 27194172 ~ 27209333 (+)
G42020 NA non-coding downstream 286538 27225283 ~ 27227610 (+)
G42031 NA non-coding downstream 403854 27342599 ~ 27342850 (+)
G42061 NA non-coding downstream 481042 27419787 ~ 27432384 (+)
G42074 NA non-coding downstream 501735 27440480 ~ 27442339 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 173740 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 389678 26542507 ~ 26548799 (+)
G41825 NA other upstream 665162 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 1030739 25904769 ~ 25907738 (+)
LOC120558082 kcna10,LOC104941363 other upstream 1065558 25767092 ~ 25872919 (+)
ephb2b LOC104917933,LOC103376520 other downstream 732218 27670963 ~ 27823260 (+)
G42449 NA other downstream 2301668 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 3170790 30109535 ~ 30135834 (+)
G43045 NA other downstream 5521387 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 5532050 32470795 ~ 32471605 (+)

Expression


Co-expression Network