G42147



Basic Information


Item Value
gene id G42147
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 27653121 ~ 27653448 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU56703
cacttgccaaataacatatttttaaaacattagttcatattttaattagttttacaatcgaaatctaaagtttatccaaacaataactccgtttccctggttacctggaacaatcattcccatccatcaggttcttatgcaatgcaaacgttgttctctccaccaggaattaggaagaaccttagatacgacttgcctcccttagcaaccggagatatttatatagtccgctcagctgatagaaccttcagtttagctacgagccagaaagctaacgctatgctagcaagatccaaagtcaataacattgtgtacagttggcaatcag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU56703 True 328 lncRNA 0.38 1 27653121 27653448

Neighbor


gene id symbol gene type direction distance location
nmur3 LOC102295936,LOC100702544,LOC102199352,LOC101463611 coding upstream 34960 27610111 ~ 27618161 (+)
alpl alpl coding upstream 111054 27521855 ~ 27542067 (+)
zgc:158258 NA coding upstream 249724 27395736 ~ 27403397 (+)
yod1 NA coding upstream 259154 27388769 ~ 27393967 (+)
pfkfb2b pfkfb2,LOC105939516 coding upstream 274800 27364700 ~ 27378321 (+)
LOC120556812 NA coding downstream 222094 27875542 ~ 27876611 (+)
lrrc38b LOC108231699,LOC101063821 coding downstream 227645 27881093 ~ 27900596 (+)
aadacl4 NA coding downstream 307277 27960725 ~ 27964094 (+)
c4h1orf158 NA coding downstream 311111 27964559 ~ 27966394 (+)
LOC120558056 NA coding downstream 713462 28366910 ~ 28369124 (+)
G42085 NA non-coding upstream 191362 27460521 ~ 27461759 (+)
G42075 NA non-coding upstream 206840 27442408 ~ 27446281 (+)
G42074 NA non-coding upstream 210782 27440480 ~ 27442339 (+)
G42061 NA non-coding upstream 220737 27419787 ~ 27432384 (+)
G42031 NA non-coding upstream 310271 27342599 ~ 27342850 (+)
G42211 NA non-coding downstream 561300 28214748 ~ 28215179 (+)
G42230 chd5,LOC102784485 non-coding downstream 907346 28560794 ~ 28561264 (+)
G42249 rpl22,LOC104952292 non-coding downstream 956769 28610217 ~ 28611502 (+)
LOC120557449 NA non-coding downstream 1177160 28830608 ~ 28836904 (+)
G42345 NA non-coding downstream 1227396 28880844 ~ 28881314 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 888384 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 1104322 26542507 ~ 26548799 (+)
G41825 NA other upstream 1379806 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 1745383 25904769 ~ 25907738 (+)
LOC120558082 kcna10,LOC104941363 other upstream 1780202 25767092 ~ 25872919 (+)
ephb2b LOC104917933,LOC103376520 other downstream 17515 27670963 ~ 27823260 (+)
G42449 NA other downstream 1586965 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 2456087 30109535 ~ 30135834 (+)
G43045 NA other downstream 4806684 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 4817347 32470795 ~ 32471605 (+)

Expression



Co-expression Network