G42211


Basic Information

Item Value
gene id G42211
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 28214748 ~ 28215179 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU56793
AGTCGGAGCATTATCGCAACCTACTGTATCCTTTATACATATTCCTTACATTCTTGTTGTTAGTCCAGTTTGTTGGAGATAAGTGAATATAAGTTTTAACACCATCTTTCCGAAGTTATTTGCTAAGATTGTTTTAATGTCCATTTGCTGAATTCTTTCACGTTCCAGTCCATCCTTTAACAACAGTCTTTCAGGTGAGTAGTGAGGGCATACCAGGAGAACATGTTCCACAGTCTCCTTTTTATTACAGGAATCACAATTTCCAGTGGGATGTTTCCCAATAAGATGGAAAGATGCACTTAACTTTGTGTGTCCCAGTCTCGTTCTACTAAACAAGCACTGTTCTCTCCAGTTTTTCCCCAGTCCTCTTTCCTCCCCCACTTCCTGCTGAAAAAAGTTTCTTCCACTTGAAGTATTCCAAAAAGGTTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56793 True 432 lncRNA 0.39 1 28214748 28215179

Neighbor

gene id symbol gene type direction distance location
c4h1orf158 NA coding upstream 248354 27964559 ~ 27966394 (+)
aadacl4 NA coding upstream 250654 27960725 ~ 27964094 (+)
lrrc38b LOC108231699,LOC101063821 coding upstream 314152 27881093 ~ 27900596 (+)
LOC120556812 NA coding upstream 338137 27875542 ~ 27876611 (+)
nmur3 LOC102295936,LOC100702544,LOC102199352,LOC101463611 coding upstream 596587 27610111 ~ 27618161 (+)
LOC120558056 NA coding downstream 151731 28366910 ~ 28369124 (+)
rnf207a rnf207 coding downstream 397361 28612540 ~ 28640689 (+)
LOC120557435 NA coding downstream 505732 28720911 ~ 28722206 (+)
LOC120557430 LOC104950703 coding downstream 622071 28837250 ~ 28855733 (+)
pnp4a LOC103367714,LOC101478937,LOC106510859 coding downstream 669397 28884576 ~ 28891360 (+)
G42147 NA non-coding upstream 561300 27653121 ~ 27653448 (+)
G42085 NA non-coding upstream 752989 27460521 ~ 27461759 (+)
G42075 NA non-coding upstream 768467 27442408 ~ 27446281 (+)
G42074 NA non-coding upstream 772409 27440480 ~ 27442339 (+)
G42061 NA non-coding upstream 782364 27419787 ~ 27432384 (+)
G42230 chd5,LOC102784485 non-coding downstream 345615 28560794 ~ 28561264 (+)
G42249 rpl22,LOC104952292 non-coding downstream 395038 28610217 ~ 28611502 (+)
LOC120557449 NA non-coding downstream 615429 28830608 ~ 28836904 (+)
G42345 NA non-coding downstream 665665 28880844 ~ 28881314 (+)
G42355 NA non-coding downstream 684648 28899827 ~ 28900125 (+)
ephb2b LOC104917933,LOC103376520 other upstream 391488 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 1450011 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 1665949 26542507 ~ 26548799 (+)
G41825 NA other upstream 1941433 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 2307010 25904769 ~ 25907738 (+)
G42449 NA other downstream 1025234 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 1894356 30109535 ~ 30135834 (+)
G43045 NA other downstream 4244953 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 4255616 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 4822755 33037934 ~ 33041311 (+)

Expression


Co-expression Network