G42345


Basic Information

Item Value
gene id G42345
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 28880844 ~ 28881314 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU56979
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgagtatatatctgtctgtctgcagctaATCTCGCTACTACTGGACCCATATCTGTGTCATATTTTTTGTGATCAAGGACCTTTAGTGGTTGCTGTGATTCACAATTTTTGAAAAACCTACTTTATTGACTGCTCTGTTTTATACCATCATTAACTACCGACTCCTTACTCACCGGCAAAAGTGATTAACAACCGCTTCAGTAGCAAAAGACAATTCCGGTGTTGTGCCAAAAATCTCCCCTCTTCTGGAATGTTGTGGCTTAACGGAGCATCTGCTGATTAATTCCATACCCGATATGTTATGAATGTGATCCACTAAAGTTAGGCATGATACGAGGCATGATACGAGATGAATAAATCCc

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56979 True 471 lncRNA 0.42 1 28880844 28881314

Neighbor

gene id symbol gene type direction distance location
LOC120557430 LOC104950703 coding upstream 25111 28837250 ~ 28855733 (+)
LOC120557435 NA coding upstream 158638 28720911 ~ 28722206 (+)
rnf207a rnf207 coding upstream 240155 28612540 ~ 28640689 (+)
LOC120558056 NA coding upstream 511720 28366910 ~ 28369124 (+)
c4h1orf158 NA coding upstream 914450 27964559 ~ 27966394 (+)
pnp4a LOC103367714,LOC101478937,LOC106510859 coding downstream 3262 28884576 ~ 28891360 (+)
rem1 rem1 coding downstream 23684 28904998 ~ 28915648 (+)
LOC120557450 NA coding downstream 44408 28925722 ~ 28949327 (+)
st3gal8 NA coding downstream 69163 28950477 ~ 28986588 (+)
c4h6orf89 clg5h6orf89,LOC103369827,LOC104961369,LOC104933301,LOC101474837,LOC102304616 coding downstream 319526 29200840 ~ 29207769 (+)
LOC120557449 NA non-coding upstream 43940 28830608 ~ 28836904 (+)
G42249 rpl22,LOC104952292 non-coding upstream 269342 28610217 ~ 28611502 (+)
G42230 chd5,LOC102784485 non-coding upstream 319580 28560794 ~ 28561264 (+)
G42211 NA non-coding upstream 665665 28214748 ~ 28215179 (+)
G42147 NA non-coding upstream 1227396 27653121 ~ 27653448 (+)
G42355 NA non-coding downstream 18513 28899827 ~ 28900125 (+)
G42362 NA non-coding downstream 36321 28917635 ~ 28918195 (+)
G42365 NA non-coding downstream 38346 28919660 ~ 28920283 (+)
LOC120557469 NA non-coding downstream 112152 28993466 ~ 28996272 (+)
G42403 NA non-coding downstream 195650 29076964 ~ 29077256 (+)
ephb2b LOC104917933,LOC103376520 other upstream 1057584 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 2116107 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 2332045 26542507 ~ 26548799 (+)
G41825 NA other upstream 2607529 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 2973106 25904769 ~ 25907738 (+)
G42449 NA other downstream 359099 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 1228221 30109535 ~ 30135834 (+)
G43045 NA other downstream 3578818 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 3589481 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 4156620 33037934 ~ 33041311 (+)

Expression


Co-expression Network