G42362


Basic Information

Item Value
gene id G42362
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 28917635 ~ 28918195 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU56997
cttagtgtcttaattaatcatagttgtgttttgggcataaattgcagtaaaccaatcagagtttcATCTCCCAtttcctttaaaagccaggcgtgtttgtaccttggcgcattactaatatgatggcggatttgctaagcaggaaggagagattttcaggcgAAGAAACTGACCTgctcgtgcgtgaagtgaaagtgCGTGAGCAGATTATATATGGCATGAGCACTATGCCACCAAAACTCCACGAGGTGAAGCAggcgttaaaataacaatgaaatgctgcgttattgactttagaccaggtttttgttggtcaatagCGCGATCAtgttccgctgcctcaagatagcaatacgccaagaattcacctgaacacacctccctgtaagaccagcacgcccatgggtgcacagatggccacaggtgcatttgctatttaaacgacgtgggcgctggacgtgaaattgacaactgcgtcggtcttacactagcaaagacacttgcgtcgggctttgcgctgcactGCGCctggtgcaagatagggccccaagAGTCtaaagc

Function

NR:

description
PREDICTED: serum deprivation-response protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56997 True 561 lncRNA 0.47 1 28917635 28918195

Neighbor

gene id symbol gene type direction distance location
rem1 rem1 coding upstream 1987 28904998 ~ 28915648 (+)
pnp4a LOC103367714,LOC101478937,LOC106510859 coding upstream 26275 28884576 ~ 28891360 (+)
LOC120557430 LOC104950703 coding upstream 61902 28837250 ~ 28855733 (+)
LOC120557435 NA coding upstream 195429 28720911 ~ 28722206 (+)
rnf207a rnf207 coding upstream 276946 28612540 ~ 28640689 (+)
LOC120557450 NA coding downstream 7527 28925722 ~ 28949327 (+)
st3gal8 NA coding downstream 32282 28950477 ~ 28986588 (+)
c4h6orf89 clg5h6orf89,LOC103369827,LOC104961369,LOC104933301,LOC101474837,LOC102304616 coding downstream 282645 29200840 ~ 29207769 (+)
LOC120557724 cenpp,LOC104951285 coding downstream 566972 29485167 ~ 29595866 (+)
zgc:153675 LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637 coding downstream 711904 29630099 ~ 29636640 (+)
G42355 NA non-coding upstream 17510 28899827 ~ 28900125 (+)
G42345 NA non-coding upstream 36321 28880844 ~ 28881314 (+)
LOC120557449 NA non-coding upstream 80731 28830608 ~ 28836904 (+)
G42249 rpl22,LOC104952292 non-coding upstream 306133 28610217 ~ 28611502 (+)
G42230 chd5,LOC102784485 non-coding upstream 356371 28560794 ~ 28561264 (+)
G42365 NA non-coding downstream 1465 28919660 ~ 28920283 (+)
LOC120557469 NA non-coding downstream 75271 28993466 ~ 28996272 (+)
G42403 NA non-coding downstream 158769 29076964 ~ 29077256 (+)
G42425 NA non-coding downstream 265943 29184138 ~ 29185612 (+)
G42427 NA non-coding downstream 267585 29185780 ~ 29186375 (+)
ephb2b LOC104917933,LOC103376520 other upstream 1094375 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 2152898 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 2368836 26542507 ~ 26548799 (+)
G41825 NA other upstream 2644320 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 3009897 25904769 ~ 25907738 (+)
G42449 NA other downstream 322218 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 1191340 30109535 ~ 30135834 (+)
G43045 NA other downstream 3541937 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 3552600 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 4119739 33037934 ~ 33041311 (+)

Expression


Co-expression Network