G42425


Basic Information

Item Value
gene id G42425
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 29184138 ~ 29185612 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57076
gtGTATTGAAGCAGCACTTTATTGCAtaataatgtatatgagagtaacAGTAGAAGACAGTCGAGGGAGTCTAATAGATGTGACAGGAACATCCAGGAACACAATACAAATTCTTCTGATTTTTGTGTTCAGACTTTGAGGATCACGTTCAGATTCCCATCAACAACCTGGACCTGAGCGGTTTTTACTCTCCACCTTTTTGAAAGTCAGCCATTGTGGTCAAAGGCTACAGTCTTGTAGAGTGTCCCAGACTTTAAGTGAATAACCAAACTGCAGCTGCCAACACTGCTGATAAACTGACATGATGCTGCTGTTTAttgaaaactgaaaaactgATGGGAGAGGAGAAAGCAAAACTACAAGACTGGGTTGTGAGACAGGGAGGGCAGTGAGTGTCGCCATGTGAACAAAGCAGGAAACAATCTGTGAATCATAAAATGAAAAAGTTTGGACTGGGAATTACTACATATTAAGACAGGTTAGTAACTGCCTACAGTTGCAGCCCCTAGCGACGCTAAAGTAACGCAACACAGTTTGGTTTCTGCTCAACATGTTGACAAGAGGCTATATCACGAAGCAAAATTCTGACCAATCAGACTACTGAAAAACTGAAGTTATAATTACTACTGGTTCCTGACAGGGACAAAGGTCCTGAGTTTACAATAAAGTGACAAGAAATAAGGAGCAGTAGAGACTTTTTTATAGATCAGCAGACTCCCCACACTTATTTACAGACTTAACctttcttttatatttaaacattaatcCTACAACAGTTTATTTTATTCTAGTTGTGCGATTATGCTCAATATATTTCACCTCGATGTaaatctcttctttttttccacctCAGTAATATAATTTGCCCACAGTTTCATCTAGTTGTCATATCATGTTATTCATGGAGCTGATGACGTTACATGTGACGTCATCAGCTCCATGAAGAACATGATTGTTCACCATTTCTGGTGAACATGCTCAGAGCTGGATTAGTAAACCAAGAGATAGCTGAAAGTGAAGCCGGGTAACCTGAAAGGGAGCCAGACTAAGATGAACTGACTTTGTGATACAGGACCTAGGTGTCACAGAACGACATTCAACAAGCAACGGTTGCCATGTGCTGGTCAAATCTCTGAACTCTGAAATAAATCTCCTGACAGAGCTACAAGAGGAGCTTCTACGGAGACACAGAGCTGCAGCTACAAACAGACTTCAAGTCGGACAGGAAgtttgtgcgtgtttgtgtaaaGGAAGGAACAGCTAGTCCATTCCCAGAGTTCCCTGGGAATCAATTGTCATCGTCGTCATCATCATTGGCAGCCAGGGAAGTAAACAAGAGGTGGGAGGAGTCTAGTGCTGCGTCCACTTGATGCTCTTCAGATCGATGCCTTCTTGAACCATCTCCCACAGAggactgacagacacagagagagagacacggagagacagacaggttagtgGGCTTTACCTACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57076 True 1475 lncRNA 0.42 1 29184138 29185612

Neighbor

gene id symbol gene type direction distance location
st3gal8 NA coding upstream 197550 28950477 ~ 28986588 (+)
LOC120557450 NA coding upstream 234811 28925722 ~ 28949327 (+)
rem1 rem1 coding upstream 268490 28904998 ~ 28915648 (+)
pnp4a LOC103367714,LOC101478937,LOC106510859 coding upstream 292778 28884576 ~ 28891360 (+)
LOC120557430 LOC104950703 coding upstream 328405 28837250 ~ 28855733 (+)
c4h6orf89 clg5h6orf89,LOC103369827,LOC104961369,LOC104933301,LOC101474837,LOC102304616 coding downstream 15228 29200840 ~ 29207769 (+)
LOC120557724 cenpp,LOC104951285 coding downstream 299555 29485167 ~ 29595866 (+)
zgc:153675 LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637 coding downstream 444487 29630099 ~ 29636640 (+)
hgh1 hgh1 coding downstream 453994 29639606 ~ 29657185 (+)
nisch NA coding downstream 484857 29670469 ~ 29717340 (+)
G42403 NA non-coding upstream 106882 29076964 ~ 29077256 (+)
LOC120557469 NA non-coding upstream 187866 28993466 ~ 28996272 (+)
G42365 NA non-coding upstream 263855 28919660 ~ 28920283 (+)
G42362 NA non-coding upstream 265943 28917635 ~ 28918195 (+)
G42355 NA non-coding upstream 284013 28899827 ~ 28900125 (+)
G42427 NA non-coding downstream 168 29185780 ~ 29186375 (+)
G42428 NA non-coding downstream 821 29186433 ~ 29186921 (+)
G42426 NA non-coding downstream 1362 29186974 ~ 29187714 (+)
G42441 NA non-coding downstream 40162 29225774 ~ 29228320 (+)
G42453 LOC104927822 non-coding downstream 71143 29256755 ~ 29291745 (+)
ephb2b LOC104917933,LOC103376520 other upstream 1360878 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 2419401 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 2635339 26542507 ~ 26548799 (+)
G41825 NA other upstream 2910823 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 3276400 25904769 ~ 25907738 (+)
G42449 NA other downstream 54801 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 923923 30109535 ~ 30135834 (+)
G43045 NA other downstream 3274520 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 3285183 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 3852322 33037934 ~ 33041311 (+)

Expression


Co-expression Network