G42428


Basic Information

Item Value
gene id G42428
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 29186433 ~ 29186921 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57079
AGCTGACTTATATTGGCCGTTGAAACAGGTGAAgcctctaaaaccagcctctgccacttgaacagctgagtcgcagccacaccatcagctggtttgagacAGGCCggttgaggattttaaaatgaatgtgctgtcgatatcttctgtaacagacgcgatggtggaatctagCTACACATCTAAATTCTCCAGCGGCATGCAGCCacctgttgtaaacaaattcaacccaagcgctctttggcgacgtggttgattctgttactgttggtcatctgtccgacaatttgattggtccgaacagatcttgttcgggcaataattgctcctcaacggatcaagtccagaccgaacttcccgacctcgaatgttgtgggcggggctaaattTGGCTGGCATCCAAGTTTAGATAATCTGAATAAACCAATTTCCAAACTGTCCGATCGTCAGCCTTCTTTTAGTGATGTCACTCTGTTCCAAGATATCAAATGt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57079 True 489 lncRNA 0.46 1 29186433 29186921

Neighbor

gene id symbol gene type direction distance location
st3gal8 NA coding upstream 199845 28950477 ~ 28986588 (+)
LOC120557450 NA coding upstream 237106 28925722 ~ 28949327 (+)
rem1 rem1 coding upstream 270785 28904998 ~ 28915648 (+)
pnp4a LOC103367714,LOC101478937,LOC106510859 coding upstream 295073 28884576 ~ 28891360 (+)
LOC120557430 LOC104950703 coding upstream 330700 28837250 ~ 28855733 (+)
c4h6orf89 clg5h6orf89,LOC103369827,LOC104961369,LOC104933301,LOC101474837,LOC102304616 coding downstream 13919 29200840 ~ 29207769 (+)
LOC120557724 cenpp,LOC104951285 coding downstream 298246 29485167 ~ 29595866 (+)
zgc:153675 LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637 coding downstream 443178 29630099 ~ 29636640 (+)
hgh1 hgh1 coding downstream 452685 29639606 ~ 29657185 (+)
nisch NA coding downstream 483548 29670469 ~ 29717340 (+)
G42427 NA non-coding upstream 58 29185780 ~ 29186375 (+)
G42425 NA non-coding upstream 821 29184138 ~ 29185612 (+)
G42403 NA non-coding upstream 109177 29076964 ~ 29077256 (+)
LOC120557469 NA non-coding upstream 190161 28993466 ~ 28996272 (+)
G42365 NA non-coding upstream 266150 28919660 ~ 28920283 (+)
G42426 NA non-coding downstream 53 29186974 ~ 29187714 (+)
G42441 NA non-coding downstream 38853 29225774 ~ 29228320 (+)
G42453 LOC104927822 non-coding downstream 69834 29256755 ~ 29291745 (+)
LOC120557726 NA non-coding downstream 277897 29464818 ~ 29466662 (+)
G42536 NA non-coding downstream 474285 29661206 ~ 29661426 (+)
ephb2b LOC104917933,LOC103376520 other upstream 1363173 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 2421696 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 2637634 26542507 ~ 26548799 (+)
G41825 NA other upstream 2913118 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 3278695 25904769 ~ 25907738 (+)
G42449 NA other downstream 53492 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 922614 30109535 ~ 30135834 (+)
G43045 NA other downstream 3273211 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 3283874 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 3851013 33037934 ~ 33041311 (+)

Expression


Co-expression Network