G42536


Basic Information

Item Value
gene id G42536
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 29661206 ~ 29661426 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57215
gccaacagttgttgccttctcaccaagctgctggcctattgtcctgtagcccatccgagccttgtgcaggtctacaattttatccctgatgtccttacacagctctctggtcttggccattgtggagaggttggagtctgtttgattgagtgtgtggacaggtgtcttttatacaggtaatgagttcaaacaggtgcagttaatacaggtaatgagtggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57215 True 221 lncRNA 0.48 1 29661206 29661426

Neighbor

gene id symbol gene type direction distance location
hgh1 hgh1 coding upstream 4021 29639606 ~ 29657185 (+)
zgc:153675 LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637 coding upstream 24566 29630099 ~ 29636640 (+)
LOC120557724 cenpp,LOC104951285 coding upstream 65340 29485167 ~ 29595866 (+)
c4h6orf89 clg5h6orf89,LOC103369827,LOC104961369,LOC104933301,LOC101474837,LOC102304616 coding upstream 453437 29200840 ~ 29207769 (+)
st3gal8 NA coding upstream 674618 28950477 ~ 28986588 (+)
nisch NA coding downstream 9043 29670469 ~ 29717340 (+)
stab1 NA coding downstream 64086 29725512 ~ 29837466 (+)
LOC120557186 NA coding downstream 311067 29972493 ~ 29975991 (+)
LOC120557789 NA coding downstream 424997 30086423 ~ 30088843 (+)
LOC120558110 LOC103358872,LOC102788290,LOC106565051,LOC100694607 coding downstream 430741 30092167 ~ 30098233 (+)
LOC120557726 NA non-coding upstream 194544 29464818 ~ 29466662 (+)
G42453 LOC104927822 non-coding upstream 369461 29256755 ~ 29291745 (+)
G42441 NA non-coding upstream 432886 29225774 ~ 29228320 (+)
G42426 NA non-coding upstream 473492 29186974 ~ 29187714 (+)
G42428 NA non-coding upstream 474285 29186433 ~ 29186921 (+)
G42655 pdhb non-coding downstream 257337 29918763 ~ 29984988 (+)
G42672 NA non-coding downstream 330497 29991923 ~ 29994778 (+)
G42674 NA non-coding downstream 341247 30002673 ~ 30005924 (+)
G42675 NA non-coding downstream 347611 30009037 ~ 30010008 (+)
G42700 rpp14,LOC102775666,LOC103374991,LOC104948461 non-coding downstream 375571 30036997 ~ 30040399 (+)
G42449 NA other upstream 418953 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 1837946 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 2896469 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 3112407 26542507 ~ 26548799 (+)
G41825 NA other upstream 3387891 26268602 ~ 26273315 (+)
ergic3 ergic3,LOC102788871 other downstream 448109 30109535 ~ 30135834 (+)
G43045 NA other downstream 2798706 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 2809369 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 3376508 33037934 ~ 33041311 (+)
G43277 NA other downstream 3526312 33187738 ~ 33212318 (+)

Expression


Co-expression Network