G42725


Basic Information

Item Value
gene id G42725
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 30144457 ~ 30145125 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57447
AAAACGTGCAGAAATCCACACTTAACCACAAAATACCTGTCAATCAATCAAAGTCGGCAGGACGGTGACGTGTTTTGATGAGGTTGTGTTGGAGAGGCCAATGTCGCTCCCACTTCTTCTGCTTCTGTCTGTCCCCTAACAAAACTACGACCATGAACATGTACCACGTCCTGCCTGCTGCAGGATTTTGTCCAAGTAATGATTTATTCAAATACGTGCCAGGTTACTGCTCGGAGACACTAGAGACAGACCATGCAGAATTAGACCAAGCTGTTGACAATACTCAACTTCTCTAGATTCCCTCCGTCTTACAGACAGTACTGTATTTGACAGCAGGTGTCGCTAACGCGACGGCTCGTCCAGGACGTGAAGACATGTTGGGTCAGTGTGAATCTGGGACTGAGGTTATAGCTAGTGACTGTGGAAGGTTAAATCAACAATCCCAGAGGAGTATTATGGCTGTAAAGAGACACTTTTATAAGTATGAAAACTGTCCAGtatttcttctctctctgtgtttaaaTAGCTTCTGAAATGTGGATGGTGACGTTTGATCGCGAAAGTTCAGTTCAGAGGCAGTTGTTGATTGCTGGTTGTTGCACCTTTTAACATCTAAATCAGTGGCAggggttatgtgtgtgttggtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57447 True 669 lncRNA 0.45 1 30144457 30145125

Neighbor

gene id symbol gene type direction distance location
hesx1 NA coding upstream 37972 30102902 ~ 30106485 (+)
LOC120558110 LOC103358872,LOC102788290,LOC106565051,LOC100694607 coding upstream 46224 30092167 ~ 30098233 (+)
LOC120557789 NA coding upstream 55614 30086423 ~ 30088843 (+)
LOC120557186 NA coding upstream 168466 29972493 ~ 29975991 (+)
stab1 NA coding upstream 306991 29725512 ~ 29837466 (+)
mych LOC103358868 coding downstream 49514 30194639 ~ 30198902 (+)
LOC120557912 NA coding downstream 209841 30354966 ~ 30377896 (+)
LOC120557913 NA coding downstream 243885 30389010 ~ 30407845 (+)
tomm34 tomm34,LOC102784590 coding downstream 283882 30429007 ~ 30442999 (+)
abraa LOC103364886,LOC100691009,LOC101485260 coding downstream 359569 30504694 ~ 30513488 (+)
G42726 NA non-coding upstream 132 30143378 ~ 30144325 (+)
G42728 NA non-coding upstream 1184 30142382 ~ 30143273 (+)
G42727 NA non-coding upstream 7448 30135986 ~ 30137009 (+)
G42700 rpp14,LOC102775666,LOC103374991,LOC104948461 non-coding upstream 104058 30036997 ~ 30040399 (+)
G42675 NA non-coding upstream 134449 30009037 ~ 30010008 (+)
G42752 NA non-coding downstream 166470 30311595 ~ 30312042 (+)
G42755 NA non-coding downstream 173054 30318179 ~ 30332735 (+)
G42766 NA non-coding downstream 189099 30334224 ~ 30334815 (+)
G42770 NA non-coding downstream 192286 30337411 ~ 30339041 (+)
G42772 NA non-coding downstream 196605 30341730 ~ 30342069 (+)
ergic3 ergic3,LOC102788871 other upstream 8623 30109535 ~ 30135834 (+)
G42449 NA other upstream 902204 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 2321197 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 3379720 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 3595658 26542507 ~ 26548799 (+)
G43045 NA other downstream 2315007 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 2325670 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 2892809 33037934 ~ 33041311 (+)
G43277 NA other downstream 3042613 33187738 ~ 33212318 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other downstream 3117070 33262195 ~ 33336767 (+)

Expression


Co-expression Network