G42836


Basic Information

Item Value
gene id G42836
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 30673827 ~ 30677017 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57581
ccggtcaaaagttcggggccacttagaaatttccattccactccattacagacagaataccagctgagatcagggcagcagttttcagatgacattatgtgcttacataattgcaaaagggttctccactGTTGTAGAAAGACGTGGCTGATCtctaatgcaatatctacattacattgcccattatcagcaaccattcatctaatgttccaaaggcccattctgtttactaatctgatatcattttaaaaggctaactgagaaaacattggagaacccttttgcaagtatgtaagcacataatgtaatctgaaaactgctgccctgcttaaaaaaacaatgcaaccaATCTCAGcgggtattctgtctgtaaaggagtggaatggaaatttctaagtgaccccaaacttttgaccggtagtgtagaCATACagtAGCCATCAAATTCAGACATTATTTAAAGGAAATGACAAATGAGGCGACATTCTGGCAGAACAAGACTTccacttttaaaatgttcttagCTGAGAACTCAAAGCTGCGGTGACAGTTTTGacaaaaattatataaagttcAAACACACAGTTCTCGTTTCTTGTTGATGTCAGTGTTGCTCAGTGTAactaaaaaagaaagacaacacacacacacaatgcaataAAAAGGTCATTGTAAAACTGTATGTTATGCTGTATGACATAGTGAAAAGTGATCAGATTTGTAACAACTCCTGTAATATTACCAGACTAATTCCCAGGAGAACTACTTTTAATTTCCTCACTTTCGTTGCTAAAACACACTTCTACCCTAACAACCACGCTCTACTGCTACATTAGTGTAgacaaatgtacatactgtaattacacctATACATAGCCAGATTCTACTGCTCTCCAGactattcatcctgcacatacacttattcttactactcttatgttaccacactgcacatagctatacatactgtacatatctgtctatatggttcacacagaatatccatatttattctgtttttcttattatatattctgctaatacactgcatatatctatattattcttactactagtataatgtcactgctactacattgcacatgtctgtacatgttgttcatacattgttcatattacacagccatatttattctgttcttataacactgcaatatatttcttgtcctgcctatgcaccacctgtctatactttgtatattgCATTGCACTTTTTCTGCTTATTTTTTGCAACTCTGGTTAGATGTAAACTGCATTTCGCTGtctacttgtactctgcacaatgacaatgaaGTTGAATCTCATCTAATCTAGTCTAGTGATAGCTTTGGGTTGTTTTTACATACGTAAACAGTGACCTCTCAGCAATAACCAATGGATACAGTTTATTACAGCAGTTTAAAACAGACGGACTCTCTCAGTTGGACTGCTGTCTGGCGCCACCATGTTGCCGGTCTGTCCCACGCCGGATTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57581 True 1496 lncRNA 0.37 2 30673827 30677017

Neighbor

gene id symbol gene type direction distance location
abraa LOC103364886,LOC100691009,LOC101485260 coding upstream 160339 30504694 ~ 30513488 (+)
tomm34 tomm34,LOC102784590 coding upstream 230828 30429007 ~ 30442999 (+)
LOC120557913 NA coding upstream 265982 30389010 ~ 30407845 (+)
LOC120557912 NA coding upstream 295931 30354966 ~ 30377896 (+)
mych LOC103358868 coding upstream 474925 30194639 ~ 30198902 (+)
lsm3 lsm3,LOC100705055 coding downstream 2299 30679316 ~ 30685535 (+)
LOC120558103 slc6a6,LOC103364884 coding downstream 144664 30821681 ~ 30873506 (+)
zgc:171566 ggh,LOC108243634,LOC102781709,LOC100692082,LOC107384984 coding downstream 700963 31377980 ~ 31417492 (+)
rspo4 LOC103374720,LOC103367962 coding downstream 1703665 32380682 ~ 32444324 (+)
ripor3 LOC100693168,LOC104944097 coding downstream 1970582 32647599 ~ 32730753 (+)
G42797 NA non-coding upstream 81232 30591943 ~ 30592595 (+)
G42793 rims4 non-coding upstream 145481 30518262 ~ 30528346 (+)
G42792 NA non-coding upstream 181986 30491600 ~ 30491841 (+)
G42777 NA non-coding upstream 223615 30405515 ~ 30450212 (+)
LOC120557914 NA non-coding upstream 261427 30410280 ~ 30412400 (+)
G42870 NA non-coding downstream 132812 30809829 ~ 30810064 (+)
G42899 NA non-coding downstream 215883 30892900 ~ 30893662 (+)
G42918 NA non-coding downstream 269355 30946372 ~ 30953050 (+)
G42949 NA non-coding downstream 707368 31384385 ~ 31384694 (+)
G42951 NA non-coding downstream 725067 31402084 ~ 31402447 (+)
ergic3 ergic3,LOC102788871 other upstream 537993 30109535 ~ 30135834 (+)
G42449 NA other upstream 1431574 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 2850567 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 3909090 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 4125028 26542507 ~ 26548799 (+)
G43045 NA other downstream 1783115 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 1793778 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 2360917 33037934 ~ 33041311 (+)
G43277 NA other downstream 2510721 33187738 ~ 33212318 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other downstream 2585178 33262195 ~ 33336767 (+)

Expression


Co-expression Network