G42949


Basic Information

Item Value
gene id G42949
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 31384385 ~ 31384694 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57710
CGGAGGTACAGAACGACAGACAGAGCTATCCCACAGCAAGAGAGAGGAGAGTTCAGCCTTTGGTCTCACAGCCTCATCACCCAGAAGGAAGCATATTCTCGGATCCTTATTTACCattattttttcagcattttgtttatttttaatttttttttatagacaaATACCCAGCACCGATATTGTAATCTTTTCATCATCAGCCTGCATCCCTCACCATCTCCAGCGGCTCTGTGTTTCTAATCCTGCCTGCCCGGTGTGTTGGATGTGTCGGCCGAGTGCAGCGGTGCTCGCGGTGTTCACCGCCTGTCTc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57710 True 310 lncRNA 0.47 1 31384385 31384694

Neighbor

gene id symbol gene type direction distance location
LOC120558103 slc6a6,LOC103364884 coding upstream 510879 30821681 ~ 30873506 (+)
lsm3 lsm3,LOC100705055 coding upstream 698850 30679316 ~ 30685535 (+)
abraa LOC103364886,LOC100691009,LOC101485260 coding upstream 870897 30504694 ~ 30513488 (+)
tomm34 tomm34,LOC102784590 coding upstream 941386 30429007 ~ 30442999 (+)
LOC120557913 NA coding upstream 976540 30389010 ~ 30407845 (+)
rspo4 LOC103374720,LOC103367962 coding downstream 995988 32380682 ~ 32444324 (+)
ripor3 LOC100693168,LOC104944097 coding downstream 1262905 32647599 ~ 32730753 (+)
psmf1 psmf1 coding downstream 1435276 32819970 ~ 32834491 (+)
cand2 LOC100694792,LOC102304752,LOC101484714,LOC108244949 coding downstream 1617409 33002103 ~ 33033297 (+)
LOC120557808 NA coding downstream 1962097 33346791 ~ 33348566 (+)
G42918 NA non-coding upstream 431335 30946372 ~ 30953050 (+)
G42899 NA non-coding upstream 490723 30892900 ~ 30893662 (+)
G42870 NA non-coding upstream 574321 30809829 ~ 30810064 (+)
G42836 NA non-coding upstream 707368 30673827 ~ 30677017 (+)
G42797 NA non-coding upstream 791790 30591943 ~ 30592595 (+)
G42951 NA non-coding downstream 17390 31402084 ~ 31402447 (+)
G42953 NA non-coding downstream 33732 31418426 ~ 31419591 (+)
G42956 NA non-coding downstream 44041 31428735 ~ 31428955 (+)
LOC120556847 NA non-coding downstream 53569 31438263 ~ 31442128 (+)
G42962 NA non-coding downstream 63315 31448009 ~ 31448390 (+)
ergic3 ergic3,LOC102788871 other upstream 1248551 30109535 ~ 30135834 (+)
G42449 NA other upstream 2142132 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 3561125 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 4619648 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 4835586 26542507 ~ 26548799 (+)
G43045 NA other downstream 1075438 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 1086101 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 1653240 33037934 ~ 33041311 (+)
G43277 NA other downstream 1803044 33187738 ~ 33212318 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other downstream 1877501 33262195 ~ 33336767 (+)

Expression


Co-expression Network