G43051 (LOC102201960)


Basic Information

Item Value
gene id G43051
gene name LOC102201960
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 32470795 ~ 32471605 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57843
TAACTGATCCAGCTCCACTGATGGCGCCATCAGGCCCGTTTCCTCTGAGGAGCCCTGCTCACCTACAAGCACGTCACTCCTTAGTTTCAAATCGAGGTCCGTTCCCCCCACGCCGTACGAGTTGAGCATGCTCTGGCCCCCCGCCGCCGAATTGAACGGGAAACCGTTGAGGGCGTCTTTGGACGCCTTCCCTCCGTGTAAAGCATCTGCAGACAGGGGGTCATGCTGCAGCACACCCAGCTCCAGGGTTTCATCCAGAGGGGGACAGTCGAGGAAATCTCCCCGGGAGCCAGGAACTATTCCCAGACTTGGGGAGGCAGAATTTTGGGCGTCCAACGGCAGAGGTTGGAGGTGAgggtgagaggaggaggaagaggaaggagaaggagcCGATGGAGGCACGGAGTGATGCTGGTGGTGggcgtggtggtggtggtgagagGACTGGTGGGGATACTCGGGGGGCTGAGGGGAGTGGCGACCCAGACCCGAATCATACAGGCAGCAGTGAGGCAGAGGCAGCTGCGGATTAGACGAGGACGACGAAGAAGTGATGCTAGAGTGAGTCACCAAGCCCGGGTGGTGGTGGCTCTGGGGGTGAAGATGAGCTGGGTGCCCCCTGACGTAGTTCCTGTGAGCTTCCAGGAAGCTCAGCTGGGGGTCGTTCAGGATGTAGAAGTCGGTGCGGCTCAGGCCGTGGCGCGCCGCCCCGATCAGGAGGTCGCGGTCGTGTTTGCCAGACTCCCACCAGACTGGAAGGTAGAGGGAGGGGCGGCACAGCTGGAGGCGGGCCGAGAGCAACGGGTGACGG

Function

NR:

description
PREDICTED: chromodomain-helicase-DNA-binding protein 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57843 True 811 TUCP 0.62 1 32470795 32471605

Neighbor

gene id symbol gene type direction distance location
rspo4 LOC103374720,LOC103367962 coding upstream 26471 32380682 ~ 32444324 (+)
zgc:171566 ggh,LOC108243634,LOC102781709,LOC100692082,LOC107384984 coding upstream 1053303 31377980 ~ 31417492 (+)
LOC120558103 slc6a6,LOC103364884 coding upstream 1597289 30821681 ~ 30873506 (+)
lsm3 lsm3,LOC100705055 coding upstream 1785260 30679316 ~ 30685535 (+)
abraa LOC103364886,LOC100691009,LOC101485260 coding upstream 1957307 30504694 ~ 30513488 (+)
ripor3 LOC100693168,LOC104944097 coding downstream 175994 32647599 ~ 32730753 (+)
psmf1 psmf1 coding downstream 348365 32819970 ~ 32834491 (+)
cand2 LOC100694792,LOC102304752,LOC101484714,LOC108244949 coding downstream 530498 33002103 ~ 33033297 (+)
LOC120557808 NA coding downstream 875186 33346791 ~ 33348566 (+)
LOC120557835 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC101485372,LOC102204254,LOC103381127 coding downstream 879763 33351368 ~ 33351936 (+)
G43049 NA non-coding upstream 1712 32468847 ~ 32469083 (+)
G43048 NA non-coding upstream 2985 32467506 ~ 32467810 (+)
G43047 NA non-coding upstream 4580 32464759 ~ 32466215 (+)
G43046 NA non-coding upstream 8483 32462039 ~ 32462312 (+)
G43044 NA non-coding upstream 10920 32459664 ~ 32459875 (+)
G43089 blcap non-coding downstream 200632 32672237 ~ 32744384 (+)
G43106 NA non-coding downstream 279187 32750792 ~ 32755672 (+)
G43111 NA non-coding downstream 297651 32769256 ~ 32769602 (+)
G43131 NA non-coding downstream 368144 32839749 ~ 32843206 (+)
G43132 NA non-coding downstream 375946 32847551 ~ 32847906 (+)
G43045 NA other upstream 9932 32460132 ~ 32460863 (+)
ergic3 ergic3,LOC102788871 other upstream 2334961 30109535 ~ 30135834 (+)
G42449 NA other upstream 3228542 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 4647535 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 5706058 26652851 ~ 26764737 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 566329 33037934 ~ 33041311 (+)
G43277 NA other downstream 716133 33187738 ~ 33212318 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other downstream 790590 33262195 ~ 33336767 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other downstream 868679 33340284 ~ 33345806 (+)
G43656 NA other downstream 2193631 34665236 ~ 34667182 (+)

Expression


Co-expression Network