G43533


Basic Information

Item Value
gene id G43533
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 34174509 ~ 34174806 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58441
GGCTACTTTAAATAGACAATTTTAAATGGTAGGGAAACAATGTGTGcctactacttggtgcacatctcaataacactagctaagtagatacatatgtcacactgtcacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaaaactaaTACGAATAGGAGTTTGATggatttaggatgcttaaagtcctgattatttacatggagtcttgtggattcaggatgcttaaagtactgattatttacatggagtctggtgggtttagcgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58441 True 298 lncRNA 0.40 1 34174509 34174806

Neighbor

gene id symbol gene type direction distance location
LOC120557827 NA coding upstream 107167 34047432 ~ 34067342 (+)
znf831 NA coding upstream 134226 34026311 ~ 34040283 (+)
barx1 barx1 coding upstream 409001 33760090 ~ 33765508 (+)
LOC120557830 LOC105888650,LOC105896821,LOC101068541,LOC103395674,LOC106527799 coding upstream 656385 33516838 ~ 33518124 (+)
LOC120557832 LOC106528837,LOC107102779 coding upstream 670201 33503798 ~ 33504308 (+)
LOC120557093 NA coding downstream 195423 34370229 ~ 34371094 (+)
LOC120557490 NA coding downstream 830136 35004942 ~ 35006128 (+)
ube2v1 LOC103133159,LOC106912622,LOC102222270,LOC103465507,LOC104930303,LOC106519068 coding downstream 988678 35163484 ~ 35199996 (+)
LOC120556883 LOC104930311,LOC103370811,LOC104960357,LOC100711115,LOC101474327 coding downstream 1100291 35275097 ~ 35278434 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding downstream 1141671 35316477 ~ 35319169 (+)
LOC120557850 NA non-coding upstream 15499 34158005 ~ 34159010 (+)
G43514 NA non-coding upstream 27441 34075871 ~ 34147068 (+)
G43512 NA non-coding upstream 103437 34070870 ~ 34071072 (+)
G43474 NA non-coding upstream 218353 33955957 ~ 33956156 (+)
G43452 NA non-coding upstream 305962 33867580 ~ 33868547 (+)
G43537 NA non-coding downstream 19222 34194028 ~ 34194326 (+)
LOC120557849 NA non-coding downstream 48626 34223432 ~ 34229932 (+)
LOC120557848 NA non-coding downstream 156638 34331444 ~ 34333902 (+)
G43595 NA non-coding downstream 221107 34395913 ~ 34396336 (+)
G43600 NA non-coding downstream 225569 34400375 ~ 34400808 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 828703 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 837742 33262195 ~ 33336767 (+)
G43277 NA other upstream 962191 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 1133198 33037934 ~ 33041311 (+)
G43051 LOC102201960 other upstream 1702904 32470795 ~ 32471605 (+)
G43656 NA other downstream 490430 34665236 ~ 34667182 (+)
LOC120556915 NA other downstream 1288966 35463772 ~ 35486235 (+)
G43924 NA other downstream 1489337 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 1787733 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 2528449 36703255 ~ 36711295 (+)

Expression


Co-expression Network