G43627


Basic Information

Item Value
gene id G43627
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 34602206 ~ 34647158 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58551
acacagatacacacacacacagacagacagacacacacagatacacacacacacacacacagacagacagacacacacagatacacacacacagacagacagacagacacacacacacacagatacacacacacacagacagacagacacacacacagacacacacacagacacacacacacacagacacacacacacacacactctgtaggGAGGAGAGTAGATATGCCCGTCTGCCGTGAACAGCCAGGTGCCTGATTGGCACAAATCTACGCTTCACGGCGGTGTGTTCCTGCCCTTAGTCTCCAGTCTGGGTCTAGTCAGACTGAGGAGCATTACATAAGTGTGTGCGTCTTACCAGAGGATGCTGAAGGACCtctttgcttcttctttttgGCCAGCTGGATGGCTCTGTAGTCAGTCCTGGCGGAGCCTCCACTCTcctgacacagaaatggtacacaTTAGTTACTACACACCATTATGTTGGCTTTTAAGAGCTAGTACTGACTACACTCCAATAGCAGACATTTGGGCCATTTCCTAAAAATAGGAACCTTTCATATCTAAGAAAAACTagcaaaaaaacaagcaaatgtgCATTTCCTTTAAAGAGAACTCCATTAATTTAGCAATGCACCCTTATAATGATGCATTCAGGCCCAGGCGTTTTCAGGGGTGCCATTACATAAGTCAATGCAAAGATGCAAATAAATGCAAATTTGCATCAGGCAGTGCAAATGGCACGAACACACAAAATTTGTGTCCATCACTTTTCTCACAAGTTGAGATATATTCGATAAACTCAAGAAAGAAATGTGCTTCCATAGCAATAGATTAGGGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58551 True 846 lncRNA 0.44 3 34602206 34647158

Neighbor

gene id symbol gene type direction distance location
LOC120557093 NA coding upstream 231112 34370229 ~ 34371094 (+)
LOC120557827 NA coding upstream 534864 34047432 ~ 34067342 (+)
znf831 NA coding upstream 561923 34026311 ~ 34040283 (+)
barx1 barx1 coding upstream 836698 33760090 ~ 33765508 (+)
LOC120557830 LOC105888650,LOC105896821,LOC101068541,LOC103395674,LOC106527799 coding upstream 1084082 33516838 ~ 33518124 (+)
LOC120557490 NA coding downstream 357784 35004942 ~ 35006128 (+)
ube2v1 LOC103133159,LOC106912622,LOC102222270,LOC103465507,LOC104930303,LOC106519068 coding downstream 516326 35163484 ~ 35199996 (+)
LOC120556883 LOC104930311,LOC103370811,LOC104960357,LOC100711115,LOC101474327 coding downstream 627939 35275097 ~ 35278434 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding downstream 669319 35316477 ~ 35319169 (+)
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding downstream 779203 35426361 ~ 35452319 (+)
G43620 NA non-coding upstream 34585 34567311 ~ 34567621 (+)
G43613 NA non-coding upstream 134858 34466866 ~ 34467348 (+)
G43600 NA non-coding upstream 201398 34400375 ~ 34400808 (+)
G43595 NA non-coding upstream 205870 34395913 ~ 34396336 (+)
LOC120557848 NA non-coding upstream 268304 34331444 ~ 34333902 (+)
G43652 NA non-coding downstream 15199 34662357 ~ 34662849 (+)
G43680 setd5 non-coding downstream 119489 34766647 ~ 34861950 (+)
G43687 NA non-coding downstream 148305 34795463 ~ 34825540 (+)
G43691 NA non-coding downstream 210745 34857903 ~ 34894774 (+)
G43700 setd5 non-coding downstream 233566 34880724 ~ 34884979 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 1256400 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 1265439 33262195 ~ 33336767 (+)
G43277 NA other upstream 1389888 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 1560895 33037934 ~ 33041311 (+)
G43051 LOC102201960 other upstream 2130601 32470795 ~ 32471605 (+)
G43656 NA other downstream 18078 34665236 ~ 34667182 (+)
LOC120556915 NA other downstream 816614 35463772 ~ 35486235 (+)
G43924 NA other downstream 1016985 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 1315381 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 2056097 36703255 ~ 36711295 (+)

Expression


Co-expression Network