G43656


Basic Information

Item Value
gene id G43656
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 34665236 ~ 34667182 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58589
cctgggacggtgccgctctcatatcaaaaatctgaacgagtttatcagacataaaccatgacaacccaagtttgatattagtaatcagaggtgcagtgctacgcgcccctctgtgcttccgttggagcagtcgcccactcatagtctaataagcacggtgtctgtcccccggctcagatcggttaaatcaaaggtaaacaaaagatgcgctatacttaacaacctaattggaattaaaactactgcaatagaacaaaataggaaaattagatgtggactattaaatattagatctctgtcttctaaagcagtactggtaaacgagttgatatcagacaataaaattgatttattttgtcttactgaaacctggctgggccatgaagactatgttagtctaaatgaagccactcctcccagccatattaatactcaaattcctagcaGGCTCGAGGGCGaggagggagttgcagccatctttgatgcaagcctgttaattactcctaaacctaaattacattataactcatttgaaagtcttgttcttaatcttcaacatccaaaatggaaaacattacagccaattatatcgttgttatttacagggctccaggtccgtattctgaatttttatctgaattctcagagtttttatcatgtttagtccttaaatcagaccaattacTTCActttgtaggtgattttaatatccatgtggacgttgacaatgacagccttagtactgctttcaactcattactggattcaatcggtttcagtcagtgtgcacaaggcgacgcactgttttaaccacaccctcgaccttgtgctggcatatggtattgaaattgaggatttaataatattttcgcaatccggtattatcagatcattctttaatcactttcgaattcttactacctgattatattaaattagataaaagctcctacaccagatgcttatctgacagtgctatagctaaatttaaagaagatattccaaa
>TU58590
cctgggacggtgccgctctcatatcaaaaatctgaacgagtttatcagacataaaccatgacaacccaagtttgatattagtaatcagaggtgcagtgctacgcgcccctctgtgcttccgttggagcagtcgcccactcatagtctaataagcacggtgtctgtcccccggctcagatcggttaaatcaaaggtaaacaaaagatgcgctatacttaacaacctaattggaattaaaactactgcaatagaacaaaataggaaaattagatgtggactattaaatattagatctctgtcttctaaagcagtactggtaaacgagttgatatcagacaataaaattgatttattttgtcttactgaaacctggctgggccatgaagactatgttagtctaaatgaagccactcctcccagccatattaatactcaaattcctagcaGGCTCGAGGGCGaggagggagttgcagccatctttgatgcaagcctgttaattactcctaaacctaaattacattataactcatttgaaagtcttgttcttaatcttcaacatccaaaatggaaaacattacagccaattatatcgttgttatttacagggctccaggtccgtattctgaatttttatctgaattctcagagtttttatcatgtttagtccttaaatcagaccaattacTTCActttgtaggtgattttaatatccatgtggacgttgacaatgacagccttagtactgctttcaactcattactggattcaatcggtttcagtcagtgtgcacaaggcgacgcactgttttaaccacaccctcgaccttgtgctggcatatggtattgaaattgaggatttaataatattttcgcaatccggtattatcagatcattctttaatcactttcgaattcttactacctgattatattaaattagataaaagctcctacaccagatgcttatctgacagtgctatagctaaatttaaagaagatattccaaa
>TU58591
cctgggacggtgccgctctcatatcaaaaatctgaacgagtttatcagacataaaccatgacaacccaagtttgatattagtaatcagaggtgcagtgctacgcgcccctctgtgcttccgttggagcagtcgcccactcatagtctaataagcacggtgtctgtcccccggctcagatcggttaaatcaaaggtaaacaaaagatgcgctatacttaacaacctaattggaattaaaactactgcaatagaacaaaataggaaaattagatgtggactattaaatattagatctctgtcttctaaagcagtactggtaaacgagttgatatcagacaataaaattgatttattttgtcttactgaaacctggctgggccatgaagactatgttagtctaaatgaagccactcctcccagccatattaatactcaaattcctagcaGGCTCGAGGGCGaggagggagttgcagccatctttgatgcaagcctgttaattactcctaaacctaaattacattataactcatttgaaagtcttgttcttaatcttcaacatccaaaatggaaaacattacagccaattatatcgttgttatttacagggctccaggtccgtattctgaatttttatctgaattctcagagtttttatcatgtttagtccttaaatcagaccaattacTTCActttgtaggtgattttaatatccatgtggacgttgacaatgacagccttagtactgctttcaactcattactggattcaatcggtttcagtcagtgtgcacaaggcgacgcactgttttaaccacaccctcgaccttgtgctggcatatggtattgaaattgaggatttaataatattttcgcaatccggtattatcagatcattctttaatcactttcgaattcttactacctgattatattaaattagataaaagctcctacaccagatgcttatctgacagtgctatagctaaatttaaagaagatattccaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58589 True 1006 TUCP 0.38 2 34665236 34667182
TU58590 False 1006 TUCP 0.38 2 34665236 34667182
TU58591 False 1006 TUCP 0.38 2 34665236 34667182

Neighbor

gene id symbol gene type direction distance location
LOC120557093 NA coding upstream 294142 34370229 ~ 34371094 (+)
LOC120557827 NA coding upstream 597894 34047432 ~ 34067342 (+)
znf831 NA coding upstream 624953 34026311 ~ 34040283 (+)
barx1 barx1 coding upstream 899728 33760090 ~ 33765508 (+)
LOC120557830 LOC105888650,LOC105896821,LOC101068541,LOC103395674,LOC106527799 coding upstream 1147112 33516838 ~ 33518124 (+)
LOC120557490 NA coding downstream 337760 35004942 ~ 35006128 (+)
ube2v1 LOC103133159,LOC106912622,LOC102222270,LOC103465507,LOC104930303,LOC106519068 coding downstream 496302 35163484 ~ 35199996 (+)
LOC120556883 LOC104930311,LOC103370811,LOC104960357,LOC100711115,LOC101474327 coding downstream 607915 35275097 ~ 35278434 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding downstream 649295 35316477 ~ 35319169 (+)
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding downstream 759179 35426361 ~ 35452319 (+)
G43652 NA non-coding upstream 2387 34662357 ~ 34662849 (+)
G43627 NA non-coding upstream 18078 34602206 ~ 34647158 (+)
G43620 NA non-coding upstream 97615 34567311 ~ 34567621 (+)
G43613 NA non-coding upstream 197888 34466866 ~ 34467348 (+)
G43600 NA non-coding upstream 264428 34400375 ~ 34400808 (+)
G43680 setd5 non-coding downstream 99465 34766647 ~ 34861950 (+)
G43687 NA non-coding downstream 128281 34795463 ~ 34825540 (+)
G43691 NA non-coding downstream 190721 34857903 ~ 34894774 (+)
G43700 setd5 non-coding downstream 213542 34880724 ~ 34884979 (+)
G43719 NA non-coding downstream 267134 34934316 ~ 34938283 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 1319430 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 1328469 33262195 ~ 33336767 (+)
G43277 NA other upstream 1452918 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 1623925 33037934 ~ 33041311 (+)
G43051 LOC102201960 other upstream 2193631 32470795 ~ 32471605 (+)
LOC120556915 NA other downstream 796590 35463772 ~ 35486235 (+)
G43924 NA other downstream 996961 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 1295357 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 2036073 36703255 ~ 36711295 (+)
plekha6 plekha6 other downstream 3293524 37960706 ~ 38096072 (+)

Expression


Co-expression Network