G43859


Basic Information

Item Value
gene id G43859
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 35458707 ~ 35459016 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58855
CGATACAATTCAAGAATGTGAATGTGACCAACAGGTTGGCAGCCCAGTTGAAGCAGCTGGTGAATGCGAATGCCCTTCCTCTGACAGCGGGTGGAAATATTTCACTCAGGAGAAGCCAGGTCACTGGTCAAAGACAAAAGAAACGGCTTAATTTACCAGCTCTAATAACCCACTCAAAGTTGGATAGGGTTATTTTAAAGGCGGTAGGCATCTTtgcatgctagcagctctaAAATGCTTATTAAAGTGTCTATTACACATAATAGTACGTGTATTAGTTTATAGTATGGGTATTTCTATCAATCTTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58855 True 310 lncRNA 0.41 1 35458707 35459016

Neighbor

gene id symbol gene type direction distance location
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding upstream 6388 35426361 ~ 35452319 (+)
LOC120558245 NA coding upstream 18568 35439977 ~ 35440139 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding upstream 139538 35316477 ~ 35319169 (+)
LOC120556883 LOC104930311,LOC103370811,LOC104960357,LOC100711115,LOC101474327 coding upstream 180273 35275097 ~ 35278434 (+)
ube2v1 LOC103133159,LOC106912622,LOC102222270,LOC103465507,LOC104930303,LOC106519068 coding upstream 258711 35163484 ~ 35199996 (+)
tp53rk tp53rk coding downstream 11978 35470994 ~ 35473326 (+)
LOC120556919 NA coding downstream 58722 35517738 ~ 35519948 (+)
sypl2a LOC103367888 coding downstream 723576 36182592 ~ 36210487 (+)
atxn7l2a atxn7l2,LOC103374593 coding downstream 757069 36216085 ~ 36242866 (+)
LOC120557073 LOC103374592,LOC100706250,LOC102300861,LOC101476702,LOC102207203,LOC102780650 coding downstream 784641 36243657 ~ 36249486 (+)
LOC120556905 NA non-coding upstream 120131 35338003 ~ 35338576 (+)
G43811 NA non-coding upstream 232059 35226402 ~ 35226648 (+)
LOC120557494 NA non-coding upstream 453939 35003472 ~ 35004768 (+)
G43737 NA non-coding upstream 459970 34996613 ~ 34998737 (+)
G43729 LOC100711384,LOC101475072,LOC102214007,LOC103373511 non-coding upstream 496524 34960653 ~ 34962183 (+)
G43874 NA non-coding downstream 70817 35529833 ~ 35530044 (+)
G43877 NA non-coding downstream 81459 35540475 ~ 35541252 (+)
LOC120556868 NA non-coding downstream 98635 35557651 ~ 35560888 (+)
G43893 NA non-coding downstream 126185 35585201 ~ 35585406 (+)
G43896 helz2 non-coding downstream 132021 35591037 ~ 35593586 (+)
G43656 NA other upstream 791525 34665236 ~ 34667182 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 2112901 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 2121940 33262195 ~ 33336767 (+)
G43277 NA other upstream 2246389 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 2417396 33037934 ~ 33041311 (+)
LOC120556915 NA other downstream 4756 35463772 ~ 35486235 (+)
G43924 NA other downstream 205127 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 503523 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 1244239 36703255 ~ 36711295 (+)
plekha6 plekha6 other downstream 2501690 37960706 ~ 38096072 (+)

Expression


Co-expression Network